RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NUP43Q8NFH3 380 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 BEST2Q8NFU1 509 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 RSPRY1Q96DX4 576 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 FCRL2Q96LA5 508 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-207ENST00000467273 CNOT6LQ96LI5 555 aaKnown RBP5.89□□□□□ -1.47
PTCD3-207ENST00000467273 MAGEB10Q96LZ2 347 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-207ENST00000467273 PPP1R10Q96QC0 940 aaKnown RBP5.89□□□□□ -1.47
PTCD3-207ENST00000467273 ADPGKQ9BRR6 497 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 PI4K2AQ9BTU6 479 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 SH3GLB2Q9NR46 395 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 SLC38A7Q9NVC3 462 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 HSFX1Q9UBD0 423 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 CACNG4Q9UBN1 327 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 MAPRE3Q9UPY8 281 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 RBM8AQ9Y5S9 174 aaKnown RBP5.89□□□□□ -1.47
PTCD3-207ENST00000467273 KIAA1549LQ6ZVL6 1849 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 TNRC6BQ9UPQ9 1833 aaKnown RBP5.89□□□□□ -1.47
PTCD3-207ENST00000467273 PLXND1Q9Y4D7 1925 aa5.89□□□□□ -1.47
PTCD3-207ENST00000467273 CACNA1EQ15878 2313 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 TCRBV16S1A1N1A0A5B0 115 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CCDC189A1A4V9 331 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 FADS2P1A8MWK0 482 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 PATE3B3GLJ2 98 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CAPN9O14815 690 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 DCLK1O15075 740 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 B4GALT5O43286 388 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 EDIL3O43854 480 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 OPHN1O60890 802 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 C1QL1O75973 258 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 ALDH1A2O94788 518 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 PRKCBP05771 671 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 SERPINF2P08697 491 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 LCP1P13796 627 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CHMLP26374 656 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 HOXC13P31276 330 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 RPL9P32969 192 aaKnown RBP5.88□□□□□ -1.47
PTCD3-207ENST00000467273 SOX5P35711 763 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 ARL2P36404 184 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CLCNKBP51801 687 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CYP4A11Q02928 519 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 GFPT1Q06210 699 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-207ENST00000467273 RUNX3Q13761 415 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 TRIP6Q15654 476 aaKnown RBP5.88□□□□□ -1.47
PTCD3-207ENST00000467273 DUOXA1Q1HG43 343 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 DCAF4L1Q3SXM0 396 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CTXN3Q4LDR2 81 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 XKR9Q5GH70 373 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CT47A1Q5JQC4 288 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-207ENST00000467273 ACBD5Q5T8D3 534 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-207ENST00000467273 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CD300LGQ6UXG3 332 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 LIPIQ6XZB0 460 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 ITIH5Q86UX2 942 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 TMC8Q8IU68 726 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 LURAP1LQ8IV03 231 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 APPL2Q8NEU8 664 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 RPLP0P6Q8NHW5 317 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 OLIG1Q8TAK6 271 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 LEO1Q8WVC0 666 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-207ENST00000467273 PIGKQ92643 395 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 C2orf40Q9H1Z8 148 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 FZD8Q9H461 694 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 TASP1Q9H6P5 420 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 KIF9Q9HAQ2 790 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 ANKEF1Q9NU02 776 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 TNFRSF10DQ9UBN6 386 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 FBXL5Q9UKA1 691 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 TBX20Q9UMR3 447 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 YIPF1Q9Y548 306 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 NPFFR2Q9Y5X5 522 aa5.88□□□□□ -1.47
PTCD3-207ENST00000467273 CFAP69A5D8W1 941 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GOLGA8AA7E2F4 631 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GOLGA8BA8MQT2 603 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 AQP7O14520 342 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 TBX3O15119 743 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 FGF10O15520 208 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 PRPF3O43395 683 aaKnown RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 LYPLA2O95372 231 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 EGFP01133 1207 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 S100BP04271 92 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ASLP04424 464 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 NTRK1P04629 796 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 FTH1P19P0C7X4 201 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 CD59P13987 128 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GCFC2P16383 781 aaKnown RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GJA1P17302 382 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 IGFBP6P24592 240 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 DDX6P26196 483 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 CDC25CP30307 473 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 IGFALSP35858 605 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 P2RY2P41231 377 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ABCG1P45844 678 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ALDH1A3P47895 512 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 DHPSP49366 369 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 CDKN1CP49918 316 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 NEK4P51957 841 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 HMGA2P52926 109 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms