RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RCOR3Q9P2K3 495 aaPredicted RBP16.5■□□□□ 0.23
GPC1-207ENST00000466624 SLC27A6Q9Y2P4 619 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 SNX10Q9Y5X0 201 aa16.5■□□□□ 0.23
GPC1-207ENST00000466624 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
GPC1-207ENST00000466624 SHISA7A6NL88 538 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 PI4K2BG5E9Z4 385 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 FAM72CH0Y354 149 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 SRGAP2O75044 1071 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 TULP3O75386 442 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 PALMO75781 387 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 LUC7L3O95232 432 aaKnown RBP16.49■□□□□ 0.23
GPC1-207ENST00000466624 SOX9P48436 509 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 PDK2Q15119 407 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 CA9Q16790 459 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 SMTNL2Q2TAL5 461 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 KCNT1Q5JUK3 1230 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 IER5LQ5T953 404 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 FAM72AQ5TYM5 149 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 FAM72DQ6L9T8 149 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 C12orf40Q86WS4 652 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 FAM72BQ86X60 149 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 VSIG1Q86XK7 387 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 CCDC117Q8IWD4 279 aaPredicted RBP16.49■□□□□ 0.23
GPC1-207ENST00000466624 FIBINQ8TAL6 211 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 CD101Q93033 1021 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 KCTD15Q96SI1 283 aaPredicted RBP16.49■□□□□ 0.23
GPC1-207ENST00000466624 P2RY13Q9BPV8 354 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 MAGEB5Q9BZ81 275 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.49■□□□□ 0.23
GPC1-207ENST00000466624 GPATCH2LQ9NWQ4 482 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 DDX56Q9NY93 547 aaKnown RBP16.49■□□□□ 0.23
GPC1-207ENST00000466624 PLK2Q9NYY3 685 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 DEC1Q9P2X7 70 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 CA14Q9ULX7 337 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 CAPN6Q9Y6Q1 641 aa16.49■□□□□ 0.23
GPC1-207ENST00000466624 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 KRBA1A5PL33 1030 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 GOLGA6L9A6NEM1 432 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 WASH4PA8MWX3 477 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 FGF10O15520 208 aaPredicted RBP16.48■□□□□ 0.23
GPC1-207ENST00000466624 CISD3P0C7P0 127 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 RHOQP17081 205 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 CTNNA2P26232 953 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 DGKGP49619 791 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 ARSEP51690 589 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 OXCT1P55809 520 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 HS1BP3Q53T59 392 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 TXNDC11Q6PKC3 985 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 ZNF852Q6ZMS4 543 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 TRIM67Q6ZTA4 783 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 MFN1Q8IWA4 741 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 MAP7D3Q8IWC1 876 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 REXO1L1PQ8IX06 675 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
GPC1-207ENST00000466624 CFAP52Q8N1V2 620 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 PHTF2Q8N3S3 785 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.48■□□□□ 0.23
GPC1-207ENST00000466624 FAM3CQ92520 227 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 HSPH1Q92598 858 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 BHMTQ93088 406 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 ALS2CR12Q96Q35 445 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 PNKPQ96T60 521 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 GOLPH3Q9H4A6 298 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 CATSPERBQ9H7T0 1116 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 PCDH18Q9HCL0 1135 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 KCND1Q9NSA2 647 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 DNAJC17Q9NVM6 304 aaKnown RBP16.48■□□□□ 0.23
GPC1-207ENST00000466624 TMEM248Q9NWD8 314 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 DONSONQ9NYP3 566 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 ZNF212Q9UDV6 495 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 PYCARDQ9ULZ3 195 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 TBC1D30Q9Y2I9 924 aa16.48■□□□□ 0.23
GPC1-207ENST00000466624 MRPS17Q9Y2R5 130 aaKnown RBP16.48■□□□□ 0.23
GPC1-207ENST00000466624 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
GPC1-207ENST00000466624 TECTAO75443 2155 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 MIF4GDA9UHW6 222 aaKnown RBP16.47■□□□□ 0.23
GPC1-207ENST00000466624 ZNF487B1APH4 448 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 H3BRJ5 948 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
GPC1-207ENST00000466624 CREB3O43889 395 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 EPHB2P29323 1055 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 CTNNA1P35221 906 aaKnown RBP16.47■□□□□ 0.23
GPC1-207ENST00000466624 ARL4AP40617 200 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 MAPKAPK2P49137 400 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 GALK1P51570 392 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 IRAK1P51617 712 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 CDH6P55285 790 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 TPI1P60174 286 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 SLC12A1Q13621 1099 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 CDH18Q13634 790 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 ALFQ53S48 1182 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 PPP6R3Q5H9R7 873 aaPredicted RBP16.47■□□□□ 0.23
GPC1-207ENST00000466624 TMEM196Q5HYL7 178 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 GRAMD4Q6IC98 578 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 KIAA0907Q7Z7F0 614 aaPredicted RBP16.47■□□□□ 0.23
GPC1-207ENST00000466624 SETD3Q86TU7 594 aaPredicted RBP16.47■□□□□ 0.23
GPC1-207ENST00000466624 NT5DC3Q86UY8 548 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 NLRP14Q86W24 1093 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 SIX5Q8N196 739 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms