RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 TMEM92Q6UXU6 159 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 PHLDB2Q86SQ0 1253 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 VPS36Q86VN1 386 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 LONP2Q86WA8 852 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 RASSF3Q86WH2 238 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 AHI1Q8N157 1196 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 ZNF513Q8N8E2 541 aaPredicted RBP9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 TXNDC5Q8NBS9 432 aaKnown RBP9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 RNF34Q969K3 372 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 IGSF8Q969P0 613 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 NTAN1Q96AB6 310 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 TTC17Q96AE7 1141 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 MRFAP1L1Q96HT8 127 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 CNPY3Q9BT09 278 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 RETREG1Q9H6L5 497 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 ELOVL2Q9NXB9 296 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 COX16Q9P0S2 106 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 GGA2Q9UJY4 613 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 SLC8A2Q9UPR5 921 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 CHD5Q8TDI0 1954 aa9.79□□□□□ -0.84
SDCCAG3-208ENST00000466579 A0A087X0T9 212 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 A0A1B0GVM2 712 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 A0A1W2PQF6 199 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 TCAF2A6NFQ2 919 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 TMEM191CA6NGB0 347 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 APBB3O95704 486 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 FAM228BP0C875 321 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 PABPC1P11940 636 aaKnown RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 HOXC13P31276 330 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 CD70P32970 193 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 CNR2P34972 360 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ADRA1BP35368 520 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 PLK1P53350 603 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ATP11AP98196 1134 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 OGDHQ02218 1023 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ZNF252P-AS1Q0IIN9 211 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 LMAN2Q12907 356 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 SLC12A1Q13621 1099 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 RAB6CQ53S08 254 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 RABGAP1LQ5R372 815 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 SH3PXD2AQ5TCZ1 1133 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 MANEALQ5VSG8 457 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 CXorf57Q6NSI4 855 aaKnown RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 C14orf80Q86SX3 495 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 FAM131BQ86XD5 332 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 CNGA4Q8IV77 575 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 MFN1Q8IWA4 741 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 CFAP52Q8N1V2 620 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 KDM1BQ8NB78 822 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 FAM172AQ8WUF8 416 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 UCMAQ8WVF2 138 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 MCEEQ96PE7 176 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ACOX2Q99424 681 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 TRIM5Q9C035 493 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 RAB6CQ9H0N0 254 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 OSBPL2Q9H1P3 480 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 EPC1Q9H2F5 836 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ABHD10Q9NUJ1 306 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ABCB8Q9NUT2 735 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 FAM86C1Q9NVL1 165 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 POLR3BQ9NW08 1133 aaPredicted RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 KIAA1522Q9P206 1035 aaPredicted RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 PPARGC1AQ9UBK2 798 aaKnown RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ZNF212Q9UDV6 495 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 INTS6Q9UL03 887 aaKnown RBP9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 TBC1D30Q9Y2I9 924 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 SCINQ9Y6U3 715 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 USP34Q70CQ2 3546 aa9.78□□□□□ -0.84
SDCCAG3-208ENST00000466579 ANKRD62A6NC57 917 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 TMCO5BA8MYB1 307 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 CCP110O43303 1012 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 CLDN11O75508 207 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 CYP1A2P05177 515 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 TPM1P09493 284 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 DLDP09622 509 aaKnown RBP9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 EIF4A3P38919 411 aaKnown RBP9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 IL12RB1P42701 662 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 FNTBP49356 437 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 IRAK1P51617 712 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 ZNF75DP51815 510 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 AIF1P55008 147 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 CDH4P55283 916 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 OXCT1P55809 520 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 CDH18Q13634 790 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 ZNF234Q14588 700 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 SLC18A3Q16572 532 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 PTPRNQ16849 979 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 FUT11Q495W5 492 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 MBLAC2Q68D91 279 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 ALKBH5Q6P6C2 394 aaKnown RBP9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 DCUN1D2Q6PH85 259 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 DNAAF5Q86Y56 855 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 CCAR2Q8N163 923 aaKnown RBP9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 ARFGAP1Q8N6T3 406 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 TC2NQ8N9U0 490 aa9.77□□□□□ -0.85
SDCCAG3-208ENST00000466579 ZNF653Q96CK0 615 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms