RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 OR6B3Q8NGW1 331 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 USP13Q92995 863 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 RAB17Q9H0T7 212 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 TMEM74BQ9NUR3 256 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 ZNF446Q9NWS9 450 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 DDX56Q9NY93 547 aaKnown RBP14.38□□□□□ -0.11
HDAC6-215ENST00000465457 HMGXB4Q9UGU5 601 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 EBF1Q9UH73 591 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 RASAL2Q9UJF2 1139 aa14.38□□□□□ -0.11
HDAC6-215ENST00000465457 MYOFQ9NZM1 2061 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 PHF2O75151 1096 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 KRT3P12035 628 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 HNRNPLP14866 589 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 GJA4P35212 333 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 GNL1P36915 607 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 SCNN1AP37088 669 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 ALDH1A3P47895 512 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 FNTAP49354 379 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 COPS2P61201 443 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 PSMC1P62191 440 aaKnown RBP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 GOLGA7BQ2TAP0 167 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 ARHGAP15Q53QZ3 475 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 TRIM61Q5EBN2 209 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 ANO7Q6IWH7 933 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 POLNQ7Z5Q5 900 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 PIP4P1Q86T03 277 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 SLC13A5Q86YT5 568 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 MDGA1Q8NFP4 955 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 OR10T2Q8NGX3 314 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 BTBD6Q96KE9 485 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 MCEEQ96PE7 176 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 SEPT5Q99719 369 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 P2RY13Q9BPV8 354 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 VIPAS39Q9H9C1 493 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 GDF3Q9NR23 364 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 OGFRQ9NZT2 677 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 CHORDC1Q9UHD1 332 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 TSPAN16Q9UKR8 245 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 L1RE1Q9UN81 338 aa14.37□□□□□ -0.11
HDAC6-215ENST00000465457 MYO18AQ92614 2054 aaKnown RBP14.37□□□□□ -0.11
HDAC6-215ENST00000465457 CYSRT1A8MQ03 144 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 KRT7P08729 469 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 ENGP17813 658 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 PTGER3P43115 390 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 ACADSBP45954 432 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 BCAT1P54687 386 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 SLC8A3P57103 927 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 LILRA4P59901 499 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 SCAPQ12770 1279 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 CYP1B1Q16678 543 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 XYLT1Q86Y38 959 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 KLHL7Q8IXQ5 586 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 CMTM8Q8IZV2 173 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 TSTD1Q8NFU3 115 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 OR2I1PQ8NGU4 316 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 RLN3Q8WXF3 142 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 CPXM1Q96SM3 734 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 MRPL45Q9BRJ2 306 aaKnown RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 AP1M1Q9BXS5 423 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 FAM129AQ9BZQ8 928 aa14.36□□□□□ -0.11
HDAC6-215ENST00000465457 FEZ2Q9UHY8 353 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 MBD1Q9UIS9 605 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
HDAC6-215ENST00000465457 RAD51CO43502 376 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 PYGMP11217 842 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 DRD1P21728 446 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 WEE1P30291 646 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 PTPN7P35236 360 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 LHX1P48742 406 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 MARCKSL1P49006 195 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 AARSP49588 968 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC6-215ENST00000465457 SEC13P55735 322 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 DR1Q01658 176 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 BST2Q10589 180 aaKnown RBP14.35□□□□□ -0.11
HDAC6-215ENST00000465457 ZNF211Q13398 564 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-215ENST00000465457 PKDCCQ504Y2 493 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 ODF2Q5BJF6 829 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 RASSF3Q86WH2 238 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 RCOR2Q8IZ40 523 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 KRT222Q8N1A0 295 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 MAB21L3Q8N8X9 362 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 GIPC2Q8TF65 315 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 CAVIN3Q969G5 261 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 PKNOX2Q96KN3 472 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 FUT8Q9BYC5 575 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 THG1LQ9NWX6 298 aaKnown RBP14.35□□□□□ -0.11
HDAC6-215ENST00000465457 PCYOX1Q9UHG3 505 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
HDAC6-215ENST00000465457 DSEQ9UL01 958 aa14.35□□□□□ -0.11
HDAC6-215ENST00000465457 NAV2Q8IVL1 2488 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms