RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HNRNPA1L2Q32P51 320 aaKnown RBP15.18■□□□□ 0.02
MCF2L-220ENST00000464800 PRAMEF14Q5SWL7 426 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 HES3Q5TGS1 186 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 PIK3R6Q5UE93 754 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 NUGGCQ68CJ6 796 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 MSANTD2Q6P1R3 559 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 UNC45BQ8IWX7 931 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 DHX40Q8IX18 779 aaKnown RBP15.18■□□□□ 0.02
MCF2L-220ENST00000464800 HJURPQ8NCD3 748 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-220ENST00000464800 OR2T34Q8NGX1 318 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 SAP25Q8TEE9 199 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 BAP1Q92560 729 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 MYO19Q96H55 970 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 OMDQ99983 421 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 PRORYQ9H606 182 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 GDF3Q9NR23 364 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 FZD4Q9ULV1 537 aa15.18■□□□□ 0.02
MCF2L-220ENST00000464800 BPTFQ12830 3046 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 TYW5A2RUC4 315 aaKnown RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 TLX3O43711 291 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 RNASEH2AO75792 299 aaKnown RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 C1QL1O75973 258 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 IGLV3-27P01718 113 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 SETSIPP0DME0 302 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 CD19P15391 556 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 EPHA8P29322 1005 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 SLC6A4P31645 630 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 CSKP41240 450 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 TARDBPQ13148 414 aaKnown RBP eCLIP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 SHBQ15464 509 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 SLC45A4Q5BKX6 768 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 FAM133BQ5BKY9 247 aaKnown RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 MMAAQ8IVH4 418 aaKnown RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 SCML4Q8N228 414 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 GUF1Q8N442 669 aaKnown RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 EID2Q8N6I1 236 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 KCTD13Q8WZ19 329 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 TTC17Q96AE7 1141 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 FCRL3Q96P31 734 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-220ENST00000464800 NRSN2Q9GZP1 204 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 NEUROG2Q9H2A3 272 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 EBF2Q9HAK2 575 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 CNGB3Q9NQW8 809 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 STIM2Q9P246 746 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 ADAMTS1Q9UHI8 967 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 RCOR1Q9UKL0 485 aa15.17■□□□□ 0.02
MCF2L-220ENST00000464800 PTPRQQ9UMZ3 2332 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 GOLGA6L7A0A1B0GV03 622 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 A0A1B0GVL5 298 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 ACSL4O60488 711 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 LCP1P13796 627 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 CCR5P51681 352 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 DAOAP59103 153 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 YWHAEP62258 255 aaKnown RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 DNM1Q05193 864 aaKnown RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 CDH18Q13634 790 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 KCNJ12Q14500 433 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 ARID5BQ14865 1188 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 FBXL19Q6PCT2 694 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 CCDC117Q8IWD4 279 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 KDM1BQ8NB78 822 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 SNIP1Q8TAD8 396 aaKnown RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 FIBINQ8TAL6 211 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 UBA3Q8TBC4 463 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 LMLNQ96KR4 655 aa15.16■□□□□ 0.02
MCF2L-220ENST00000464800 PRICKLE1Q96MT3 831 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 DDX50Q9BQ39 737 aaKnown RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 TPX2Q9ULW0 747 aaKnown RBP15.16■□□□□ 0.02
MCF2L-220ENST00000464800 EDDM13A0A1B0GTR0 161 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 A0A1W2PR77 199 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
MCF2L-220ENST00000464800 CMA1P23946 247 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 PSMD8P48556 350 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 MCCD1P59942 119 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-220ENST00000464800 CUL2Q13617 745 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 PKP1Q13835 747 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 RTP5Q14D33 572 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 EDRF1Q3B7T1 1238 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 ZCWPW2Q504Y3 356 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 C9orf64Q5T6V5 341 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 SND1Q7KZF4 910 aaKnown RBP eCLIP15.15■□□□□ 0.02
MCF2L-220ENST00000464800 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 CARNMT1Q8N4J0 409 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 OXR1Q8N573 874 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 LSM14AQ8ND56 463 aaKnown RBP15.15■□□□□ 0.02
MCF2L-220ENST00000464800 TSC1Q92574 1164 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 COL26A1Q96A83 441 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 SERAC1Q96JX3 654 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 MRGPRX3Q96LB0 322 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 INTS6Q9UL03 887 aaKnown RBP15.15■□□□□ 0.02
MCF2L-220ENST00000464800 ERVW-1Q9UQF0 538 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 RAI2Q9Y5P3 530 aa15.15■□□□□ 0.02
MCF2L-220ENST00000464800 ASH1LQ9NR48 2969 aaKnown RBP15.15■□□□□ 0.02
MCF2L-220ENST00000464800 FLNBO75369 2602 aaKnown RBP15.14■□□□□ 0.01
MCF2L-220ENST00000464800 TARSL2A2RTX5 802 aaKnown RBP15.14■□□□□ 0.01
MCF2L-220ENST00000464800 TLR4O00206 839 aa15.14■□□□□ 0.01
MCF2L-220ENST00000464800 O00370 1275 aa15.14■□□□□ 0.01
MCF2L-220ENST00000464800 WNT9AO14904 365 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms