RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PLK1P53350 603 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 NRG1Q02297 640 aaPredicted RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 AUHQ13825 339 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 ARL13BQ3SXY8 428 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 C2CD6Q53TS8 623 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 ASCL5Q7RTU5 278 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF571Q7Z3V5 609 aaPredicted RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 GPR161Q8N6U8 529 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 ZC3H10Q96K80 434 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 STIM2Q9P246 746 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 HS3ST4Q9Y661 456 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 H0Y626 953 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 RTN2O75298 545 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CLDN11O75508 207 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 DLDP09622 509 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 C7P10643 843 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 POLR2EP19388 210 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 HNRNPH3P31942 346 aaKnown RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 SIM2Q14190 667 aaPredicted RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 PPP1R15BQ5SWA1 713 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 E4F1Q66K89 784 aaPredicted RBP13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 MBLAC2Q68D91 279 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 SPECC1LQ69YQ0 1117 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 FBXL22Q6P050 247 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 LRRC31Q6UY01 552 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CEP68Q76N32 757 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 ADIPOR2Q86V24 386 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CARNMT1Q8N4J0 409 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 ADAM33Q9BZ11 813 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 PARVAQ9NVD7 372 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CALCOCO1Q9P1Z2 691 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 PLA2G4CQ9UP65 541 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 EML5Q05BV3 1969 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 CKAP5Q14008 2032 aa13.49□□□□□ -0.25
R3HDM1-213ENST00000463230 A0A1W2PQF6 199 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 TCRBV21S2A2A0A5A6 115 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 LRP3O75074 770 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ADCY5O95622 1261 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 GYPCP04921 128 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 SRPRAP08240 638 aaKnown RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 TPM1P09493 284 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF143P52747 638 aaPredicted RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 AIF1P55008 147 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 CDH4P55283 916 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 SULT2A1Q06520 285 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 LMAN2Q12907 356 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF234Q14588 700 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 METTL3Q86U44 580 aaKnown RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 RUBCNQ92622 972 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 NTAN1Q96AB6 310 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 RPRD1AQ96P16 312 aaPredicted RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 NCAPGQ9BPX3 1015 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 CNPY3Q9BT09 278 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 GMEB2Q9UKD1 530 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 IGLV3-10A0A075B6K4 115 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 DRGXA6NNA5 263 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.255e-14■■■■□ 20.6
R3HDM1-213ENST00000463230 TFE3P19532 575 aaPredicted RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 CD70P32970 193 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 FUT11Q495W5 492 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 HGSNATQ68CP4 663 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 TMEM215Q68D42 235 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 PLEKHA7Q6IQ23 1121 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ANO7Q6IWH7 933 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF683Q8IZ20 524 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 EMC1Q8N766 993 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 MDGA1Q8NFP4 955 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 MYEOVQ96EZ4 313 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 OSBPL2Q9H1P3 480 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 PPARGC1AQ9UBK2 798 aaKnown RBP13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 SYNCRIPO60506 623 aaKnown RBP13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF217O75362 1048 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 RHOBTB1O94844 696 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 RFC1P35251 1148 aaPredicted RBP13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 SCAPQ12770 1279 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 ZNF177Q13360 481 aaPredicted RBP13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 PITRM1Q5JRX3 1037 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 WDR59Q6PJI9 974 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 CFAP52Q8N1V2 620 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 WFDC5Q8TCV5 224 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 FNIP1Q8TF40 1166 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 ACOX2Q99424 681 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 TMEM245Q9H330 911 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 POLR3BQ9NW08 1133 aaPredicted RBP13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
R3HDM1-213ENST00000463230 SUN2Q9UH99 717 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms