RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SCAMP3O14828 347 aaKnown RBP14.79□□□□□ -0.04
COL6A1-202ENST00000463060 CST8O60676 142 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 CNTN5O94779 1100 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 RHOQP17081 205 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 EPHB2P29323 1055 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 GBP2P32456 591 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-202ENST00000463060 CHKAP35790 457 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 SGSHP51688 502 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 TPI1P60174 286 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 TFDP2Q14188 446 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 PAFAH1B3Q15102 231 aaKnown RBP14.79□□□□□ -0.04
COL6A1-202ENST00000463060 WHAMMP3Q1A5X7 153 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 ALFQ53S48 1182 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 NCBP2-AS2Q69YL0 99 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 LRRC31Q6UY01 552 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 OTOP3Q7RTS5 596 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 CHSY1Q86X52 802 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 MFSD6LQ8IWD5 586 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 LGI2Q8N0V4 545 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 BPIFB1Q8TDL5 484 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 PLA2G2FQ9BZM2 168 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 SPTBN5Q9NRC6 3674 aaKnown RBP14.79□□□□□ -0.04
COL6A1-202ENST00000463060 F5H5T6 163 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 DLL1O00548 723 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 FGF10O15520 208 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-202ENST00000463060 ECI2O75521 394 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 TJP3O95049 919 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 RPS24P62847 133 aaKnown RBP14.78□□□□□ -0.04
COL6A1-202ENST00000463060 FCHO2Q0JRZ9 810 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 SLC10A2Q12908 348 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-202ENST00000463060 SKIV2LQ15477 1246 aaKnown RBP14.78□□□□□ -0.04
COL6A1-202ENST00000463060 SMAD2Q15796 467 aaKnown RBP14.78□□□□□ -0.04
COL6A1-202ENST00000463060 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 DNTTIP2Q5QJE6 756 aaKnown RBP14.78□□□□□ -0.04
COL6A1-202ENST00000463060 MPP7Q5T2T1 576 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 AFMIDQ63HM1 303 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 KAZNQ674X7 775 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 PARM1Q6UWI2 310 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 VITQ6UXI7 678 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 ELSPBP1Q96BH3 223 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 ASIC4Q96FT7 647 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 CAPZA3Q96KX2 299 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 FAM83CQ9BQN1 747 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 ZYG11BQ9C0D3 744 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 ZFP14Q9HCL3 533 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 TMEM248Q9NWD8 314 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 MPP6Q9NZW5 540 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 PRUNE2Q8WUY3 3088 aa14.78□□□□□ -0.04
COL6A1-202ENST00000463060 APOC4-APOC2K7ER74 178 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 TRDMT1O14717 391 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 SLC9A3R1O14745 358 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 TSPAN3O60637 253 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 PENKP01210 267 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 APOC2P02655 101 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 ZFXP17010 805 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 HTR4Q13639 388 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 CYP1B1Q16678 543 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 LONRF2Q1L5Z9 754 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 EML3Q32P44 896 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 RABGAP1LQ5R372 815 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 FYB2Q5VWT5 728 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 RHBDF2Q6PJF5 856 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 TMEM25Q86YD3 366 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 CFAP52Q8N1V2 620 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 UMODL1-AS1Q8N2C9 162 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 NPWQ8N729 165 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 RTL3Q8N8U3 475 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 PRELID2Q8N945 189 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 OSCP1Q8WVF1 389 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 MAIP1Q8WWC4 291 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 FGF14Q92915 247 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 TMA16Q96EY4 203 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 RPRD1AQ96P16 312 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 NAP1L3Q99457 506 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 RPP25Q9BUL9 199 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 PHF7Q9BWX1 381 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 MAK16Q9BXY0 300 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 NOL6Q9H6R4 1146 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 CATSPERBQ9H7T0 1116 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 NDFIP2Q9NV92 336 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 STIM2Q9P246 746 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 SAE1Q9UBE0 346 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 R3HDM2Q9Y2K5 976 aaKnown RBP14.77□□□□□ -0.05
COL6A1-202ENST00000463060 WNT6Q9Y6F9 365 aa14.77□□□□□ -0.05
COL6A1-202ENST00000463060 APOL1O14791 398 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 DAPK3O43293 454 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 CLDN11O75508 207 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 TGM2P21980 687 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 PAFAH1B1P43034 410 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 NR2C2P49116 596 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 VCPP55072 806 aaKnown RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 CDH4P55283 916 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 GBE1Q04446 702 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 MPPE1Q53F39 396 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 TTC39BQ5VTQ0 682 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 RWDD4Q6NW29 188 aaKnown RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 NPNTQ6UXI9 565 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 MTSS1LQ765P7 747 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms