RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 APOBEC2Q9Y235 224 aaKnown RBP15.26■□□□□ 0.03
SMPD4-216ENST00000461187 BAHCC1Q9P281 2608 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 TAF4O00268 1085 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 CSKP41240 450 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 GPD2P43304 727 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 RPS24P62847 133 aaKnown RBP15.25■□□□□ 0.03
SMPD4-216ENST00000461187 KCNH2Q12809 1159 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 NNTQ13423 1086 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 KIF19Q2TAC6 998 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 TTC31Q49AM3 519 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-216ENST00000461187 ZNF776Q68DI1 518 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-216ENST00000461187 TRIM59Q8IWR1 403 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 NELFBQ8WX92 580 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 SLC39A13Q96H72 371 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 MRGPRX3Q96LB0 322 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 SERPINB11Q96P15 392 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 DDX50Q9BQ39 737 aaKnown RBP15.25■□□□□ 0.03
SMPD4-216ENST00000461187 ORAI3Q9BRQ5 295 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 NUCKS1Q9H1E3 243 aaKnown RBP15.25■□□□□ 0.03
SMPD4-216ENST00000461187 RSPH9Q9H1X1 276 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-216ENST00000461187 SGK2Q9HBY8 427 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 TM9SF3Q9HD45 589 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 CNTN6Q9UQ52 1028 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 NAALADL1Q9UQQ1 740 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 TLR6Q9Y2C9 796 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 ANKRD6Q9Y2G4 727 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 PCDHGB2Q9Y5G2 931 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 SNX11Q9Y5W9 270 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
SMPD4-216ENST00000461187 GRIA4P48058 902 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 NUCB2P80303 420 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 TEAD4Q15561 434 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 FSCBQ5H9T9 825 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 MS4A13Q5J8X5 152 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 SYPL2Q5VXT5 272 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 CCNI2Q6ZMN8 369 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-216ENST00000461187 MMS22LQ6ZRQ5 1243 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 CFAP52Q8N1V2 620 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 ADAM32Q8TC27 787 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 ST7Q9NRC1 585 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 TOR4AQ9NXH8 423 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 KIAA1522Q9P206 1035 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-216ENST00000461187 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 ITPR1Q14643 2758 aa15.24■□□□□ 0.03
SMPD4-216ENST00000461187 TRPM6Q9BX84 2022 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 BICDL2A1A5D9 508 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 TYW5A2RUC4 315 aaKnown RBP15.23■□□□□ 0.03
SMPD4-216ENST00000461187 FLRT2O43155 660 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 SIN3BO75182 1162 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 DKK1O94907 266 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 FSBPO95073 299 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 ASLP04424 464 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 IGHV4-34P06331 123 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 CD27P26842 260 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 ACADSBP45954 432 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 MARSP56192 900 aaKnown RBP15.23■□□□□ 0.03
SMPD4-216ENST00000461187 ST8SIA6P61647 398 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 SCAPQ12770 1279 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 MORC3Q14149 939 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 ARID5BQ14865 1188 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 HNRNPA1L2Q32P51 320 aaKnown RBP15.23■□□□□ 0.03
SMPD4-216ENST00000461187 DCAF6Q58WW2 860 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 KCNT1Q5JUK3 1230 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 DENND1BQ6P3S1 775 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 LAYNQ6UX15 382 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 USP30Q70CQ3 517 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 BEND5Q7L4P6 421 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 TAC4Q86UU9 113 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 PROSER1Q86XN7 944 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 CARNMT1Q8N4J0 409 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 KDM1BQ8NB78 822 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 RHBDD1Q8TEB9 315 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 FAM149B1Q96BN6 582 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 CDC6Q99741 560 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 INTS2Q9H0H0 1204 aaKnown RBP15.23■□□□□ 0.03
SMPD4-216ENST00000461187 PABPC3Q9H361 631 aaKnown RBP15.23■□□□□ 0.03
SMPD4-216ENST00000461187 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 XPO7Q9UIA9 1087 aaKnown RBP15.23■□□□□ 0.03
SMPD4-216ENST00000461187 SCML1Q9UN30 329 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 ERVW-1Q9UQF0 538 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
SMPD4-216ENST00000461187 KCNK3O14649 394 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 SART1O43290 800 aaKnown RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 LUC7L3O95232 432 aaKnown RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 MOCS2O96007 188 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 AFPP02771 609 aaKnown RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 ATXN1LP0C7T5 689 aaKnown RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 KRT5P13647 590 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 CTSOP43234 321 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 STX17P56962 302 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 CDH18Q13634 790 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 MEA1Q16626 185 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 PITRM1Q5JRX3 1037 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 C9orf64Q5T6V5 341 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 KIAA0895LQ68EN5 471 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 DHX40Q8IX18 779 aaKnown RBP15.22■□□□□ 0.03
SMPD4-216ENST00000461187 STK32AQ8WU08 396 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 IGSF8Q969P0 613 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 FBXL12Q9NXK8 326 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms