RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NACC2Q96BF6 587 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 RNF31Q96EP0 1072 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 AGAP2Q99490 1192 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 MPHOSPH8Q99549 860 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 AMBRA1Q9C0C7 1298 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 INTS2Q9H0H0 1204 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 SH3GLB2Q9NR46 395 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 SEPT11Q9NVA2 429 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 TBC1D14Q9P2M4 693 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 ANKFY1Q9P2R3 1169 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PACSIN3Q9UKS6 424 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 SUFUQ9UMX1 484 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 SLC12A4Q9UP95 1085 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 MAP3K2Q9Y2U5 619 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PCDHB2Q9Y5E7 798 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 ABCC9O60706 1549 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 hCG_1807616A0A1W2PRN6 198 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 A1L4Q6 167 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 SH2D7A6NKC9 451 aaPredicted RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 GTPBP1O00178 669 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 GRM8O00222 908 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PSMD9O00233 223 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 TSPAN4O14817 238 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 NKX2-8O15522 239 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 DHX16O60231 1041 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 TULP3O75386 442 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 NUDT3O95989 172 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 DNTTP04053 509 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 CFIP05156 583 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 RHOP08100 348 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PORP16435 677 aaPredicted RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 CXCR5P32302 372 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 GRK5P34947 590 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 LIPAP38571 399 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PCP4P48539 62 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 CLCN2P51788 898 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 DGKQP52824 942 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 RCAN1P53805 252 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 FOXL2P58012 376 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 TAS2R50P59544 299 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 NANOS3P60323 173 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 GUCY1B3Q02153 619 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 THOC5Q13769 683 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 CBFBQ13951 182 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 INO80CQ6PI98 192 aaPredicted RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 MAVSQ7Z434 540 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 ADGRG6Q86SQ4 1221 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 ADSSL1Q8N142 457 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 RUFY2Q8WXA3 655 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 SOCS4Q8WXH5 440 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 CAVIN3Q969G5 261 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 R3HDM4Q96D70 268 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 VPS50Q96JG6 964 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PPP1R10Q96QC0 940 aaKnown RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 DPCDQ9BVM2 203 aaPredicted RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 WDR11Q9BZH6 1224 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 TAOK3Q9H2K8 898 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PDE11AQ9HCR9 933 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 PLSCR4Q9NRQ2 329 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 DIAPH3Q9NSV4 1193 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 INTS13Q9NVM9 706 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 SLC25A10Q9UBX3 287 aaPredicted RBP3.23□□□□□ -1.89
HPS3-203ENST00000460822 ENTPD2Q9Y5L3 495 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 FPGT-TNNI3KV9GXZ4 949 aa3.23□□□□□ -1.89
HPS3-203ENST00000460822 TRGV11A0A075B6L2 103 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 CENPVL1A0A0U1RR11 272 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 NPIPB15A6NHN6 443 aaPredicted RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 FAM90A7PA6NKC0 464 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 A8MVJ9 347 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 FAM90A22PA8MWA6 464 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 FAM90A12PA8MX19 464 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 FAM90A23PA8MXZ1 464 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 TNFSF14O43557 240 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 SPRY2O43597 315 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 GJB3O75712 270 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 LAMP2P13473 410 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 KRT4P19013 534 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 BMPR1AP36894 532 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 HNRNPMP52272 730 aaKnown RBP eCLIP3.22□□□□□ -1.89
HPS3-203ENST00000460822 RPS3AP61247 264 aaKnown RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 DEUP1Q05D60 604 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 PTP4A2Q12974 167 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 WTAPQ15007 396 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 RUNDC3AQ59EK9 446 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 STRIP1Q5VSL9 837 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 ARMC6Q6NXE6 501 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 ARHGEF19Q8IW93 802 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.22□□□□□ -1.89
HPS3-203ENST00000460822 NKAIN3Q8N8D7 197 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 CPEB3Q8NE35 698 aaKnown RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 RFWD2Q8NHY2 731 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 ETNPPLQ8TBG4 499 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 ZCCHC10Q8TBK6 192 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 XAGE5Q8WWM1 108 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 NSUN4Q96CB9 384 aaKnown RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 KIF1BPQ96EK5 621 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 TRMT61AQ96FX7 289 aaKnown RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 MASTLQ96GX5 879 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 PRR11Q96HE9 360 aaPredicted RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 EYA3Q99504 573 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms