RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CARNMT1Q8N4J0 409 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 TMA16Q96EY4 203 aaKnown RBP13.24□□□□□ -0.29
COL18A1-206ENST00000459895 HAPLN3Q96S86 360 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
COL18A1-206ENST00000459895 ABCB8Q9NUT2 735 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 PCSK1NQ9UHG2 260 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 FBXO10Q9UK96 956 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 INTUQ9ULD6 942 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 FZD10Q9ULW2 581 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 AP4E1Q9UPM8 1137 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 PCDHA13Q9Y5I0 950 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
COL18A1-206ENST00000459895 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 ZDBF2Q9HCK1 2354 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CKAP5Q14008 2032 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 IGLV3-10A0A075B6K4 115 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 A0A0U1RQJ8 604 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 MTA2O94776 668 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 PROSCO94903 275 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 IL1R2P27930 398 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 GJC1P36383 396 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 GRIA2P42262 883 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 MAGEA1P43355 309 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 NUMBP49757 651 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 CCZ1BP86790 482 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
COL18A1-206ENST00000459895 NRG1Q02297 640 aaPredicted RBP13.23□□□□□ -0.29
COL18A1-206ENST00000459895 LMAN2Q12907 356 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 SEMA3BQ13214 749 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 C5orf22Q49AR2 442 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 TFAP2DQ7Z6R9 452 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 SLFN11Q7Z7L1 901 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 RHOT2Q8IXI1 618 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL18A1-206ENST00000459895 OR52K2Q8NGK3 314 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 RPLP0P6Q8NHW5 317 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 SLC35G2Q8TBE7 412 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 ATRIPQ8WXE1 791 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 LMLNQ96KR4 655 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 TMEM51Q9NW97 253 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 C2orf42Q9NWW7 574 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 ZNF212Q9UDV6 495 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 IP6K2Q9UHH9 426 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 GGA2Q9UJY4 613 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 HCN2Q9UL51 889 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 USP18Q9UMW8 372 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 SLC27A6Q9Y2P4 619 aa13.23□□□□□ -0.29
COL18A1-206ENST00000459895 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 RNF8O76064 485 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 LRIG2O94898 1065 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 IPO7O95373 1038 aaKnown RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 PABPC1P11940 636 aaKnown RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 HOXC13P31276 330 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 PCK1P35558 622 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 CSKP41240 450 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 MAGEA9P43362 315 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 KIR2DL1P43626 348 aaPredicted RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 VAV2P52735 878 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 AIF1P55008 147 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 MTAPQ13126 283 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 PIGHQ14442 188 aaPredicted RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 GSE1Q14687 1217 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 TMEM215Q68D42 235 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 CHST9Q7L1S5 443 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 TBC1D31Q96DN5 1066 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 KCTD15Q96SI1 283 aaPredicted RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 NELL2Q99435 816 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 ZYG11BQ9C0D3 744 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 ZWILCHQ9H900 591 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 LUC7LQ9NQ29 371 aaKnown RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 KLHL11Q9NVR0 708 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
COL18A1-206ENST00000459895 OR12D3Q9UGF7 316 aa13.22□□□□□ -0.29
COL18A1-206ENST00000459895 EML5Q05BV3 1969 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 H0Y626 953 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 MYO1FO00160 1098 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 CREB3O43889 395 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 SRGAP2O75044 1071 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 AVPR2P30518 371 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 MAN1A1P33908 653 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 CDH4P55283 916 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 TAS2R40P59535 323 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 MESDQ14696 234 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 ACAP1Q15027 740 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 TCEAL1Q15170 157 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms