RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 HNRNPA1L2Q32P51 320 aaKnown RBP22.34■■□□□ 1.17
CPNE1-220ENST00000458038 INAVAQ3KP66 663 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 FOXR2Q6PJQ5 311 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 BEND5Q7L4P6 421 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 WFDC5Q8TCV5 224 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 SKA1Q96BD8 255 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 LMLNQ96KR4 655 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 SNX11Q9Y5W9 270 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 ADAMTS20P59510 1910 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 GOLGA6L7A0A1B0GV03 622 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 TARSL2A2RTX5 802 aaKnown RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 TRIM49BA6NDI0 452 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 PAPSS1O43252 624 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 TNFSF14O43557 240 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 MOCS3O95396 460 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 ACADSBP45954 432 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 RACK1P63244 317 aaKnown RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 CCDC40Q4G0X9 1142 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 ADAT2Q7Z6V5 191 aaKnown RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 ELOA2Q8IYF1 753 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 PABPC3Q9H361 631 aaKnown RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 STIM2Q9P246 746 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 DKK4Q9UBT3 224 aa22.33■■□□□ 1.17
CPNE1-220ENST00000458038 TPX2Q9ULW0 747 aaKnown RBP22.33■■□□□ 1.17
CPNE1-220ENST00000458038 LAMA5O15230 3695 aa22.33■■□□□ 1.16
CPNE1-220ENST00000458038 RNF225M0QZC1 329 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-220ENST00000458038 SRPRAP08240 638 aaKnown RBP22.32■■□□□ 1.16
CPNE1-220ENST00000458038 CSKP41240 450 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 RPL34P49207 117 aaKnown RBP22.32■■□□□ 1.16
CPNE1-220ENST00000458038 MEA1Q16626 185 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 KIAA0895LQ68EN5 471 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 NADSYN1Q6IA69 706 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 LMO3Q8TAP4 145 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 GANCQ8TET4 914 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 MYO19Q96H55 970 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 FCRL2Q96LA5 508 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-220ENST00000458038 ZSWIM1Q9BR11 485 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 TOR4AQ9NXH8 423 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 FBXL12Q9NXK8 326 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 GPSM3Q9Y4H4 160 aa22.32■■□□□ 1.16
CPNE1-220ENST00000458038 LRRC72A6NJI9 287 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 ATXN1LP0C7T5 689 aaKnown RBP22.31■■□□□ 1.16
CPNE1-220ENST00000458038 BRD2P25440 801 aaKnown RBP22.31■■□□□ 1.16
CPNE1-220ENST00000458038 CTSKP43235 329 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 CDH18Q13634 790 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 MS4A13Q5J8X5 152 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 DQX1Q8TE96 717 aaKnown RBP22.31■■□□□ 1.16
CPNE1-220ENST00000458038 CLEC4CQ8WTT0 213 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 STK32AQ8WU08 396 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 SLC39A13Q96H72 371 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 ACE2Q9BYF1 805 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-220ENST00000458038 MIS12Q9H081 205 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 ADAMTS1Q9UHI8 967 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 FZD4Q9ULV1 537 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 SLCO1B1Q9Y6L6 691 aa22.31■■□□□ 1.16
CPNE1-220ENST00000458038 A0A1W2PPC4 97 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 BICDL2A1A5D9 508 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 PIK3R2O00459 728 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 VILLO15195 856 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 C21orf59P57076 290 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 RPS24P62847 133 aaKnown RBP22.3■■□□□ 1.16
CPNE1-220ENST00000458038 SCUBE3Q8IX30 993 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 CARNMT1Q8N4J0 409 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 EHBP1Q8NDI1 1231 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 FAM149B1Q96BN6 582 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 ORAI3Q9BRQ5 295 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 INTS6Q9UL03 887 aaKnown RBP22.3■■□□□ 1.16
CPNE1-220ENST00000458038 CNTN6Q9UQ52 1028 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 ERVW-1Q9UQF0 538 aa22.3■■□□□ 1.16
CPNE1-220ENST00000458038 EDDM13A0A1B0GTR0 161 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 SIN3BO75182 1162 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 GNA14O95837 355 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 APOEP02649 317 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 FYNP06241 537 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 IGHV4-34P06331 123 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 GPD2P43304 727 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 GALCP54803 685 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 ECT2LQ008S8 904 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 SLC12A1Q13621 1099 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 CST6Q15828 149 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 PITRM1Q5JRX3 1037 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 C9orf64Q5T6V5 341 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 OR2T34Q8NGX1 318 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 MRGPRX3Q96LB0 322 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 PRICKLE1Q96MT3 831 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-220ENST00000458038 OMDQ99983 421 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 ST7Q9NRC1 585 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 BTBD3Q9Y2F9 522 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 ITIH6Q6UXX5 1313 aa22.29■■□□□ 1.16
CPNE1-220ENST00000458038 H0Y8X5 98 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 CAPN9O14815 690 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 MED7O43513 233 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 LUC7L3O95232 432 aaKnown RBP22.28■■□□□ 1.16
CPNE1-220ENST00000458038 CCR5P51681 352 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 NUCB2P80303 420 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 RNF219Q5W0B1 726 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-220ENST00000458038 RRAGAQ7L523 313 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 KAT5Q92993 513 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 BTN2A3PQ96KV6 586 aa22.28■■□□□ 1.16
CPNE1-220ENST00000458038 MED15Q96RN5 788 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms