RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RNF139Q8WU17 664 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NXPE2Q96DL1 559 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TMEM176AQ96HP8 235 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CNDP2Q96KP4 475 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RPL10LQ96L21 214 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FCRL3Q96P31 734 aaPredicted RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CDK5RAP1Q96SZ6 601 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CDC6Q99741 560 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ACE2Q9BYF1 805 aaPredicted RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DCLK3Q9C098 648 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MIS12Q9H081 205 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 LRRC4Q9HBW1 653 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FZD3Q9NPG1 666 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SCUBE2Q9NQ36 999 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FBXL12Q9NXK8 326 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CEP83Q9Y592 693 aa6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TLN1Q9Y490 2541 aaKnown RBP6.23□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KIF26BQ2KJY2 2108 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AHCTF1Q8WYP5 2266 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 A0A087WV48 116 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 A0A1B0GTQ1 180 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PMS2P1A4D2B8 440 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RNF103O00237 685 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IKBKBO14920 756 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 XPO1O14980 1071 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FFAR2O15552 330 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PCDHGA12O60330 932 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BRINP1O60477 761 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RTN2O75298 545 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RFPL3O75679 317 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IGLV3-27P01718 113 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 C7P10643 843 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PRLRP16471 622 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 POLR2EP19388 210 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PSMC2P35998 433 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SYKP43405 635 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GALCP54803 685 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DAOAP59103 153 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BST2Q10589 180 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TARDBPQ13148 414 aaKnown RBP eCLIP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PNOCQ13519 176 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HNRNPA1L2Q32P51 320 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SGO2Q562F6 1265 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PITRM1Q5JRX3 1037 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ADGRF1Q5T601 910 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RAP1GAP2Q684P5 730 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KRT39Q6A163 491 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PMF1Q6P1K2 205 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TAC4Q86UU9 113 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 APCDD1Q8J025 514 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ARHGAP18Q8N392 663 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GALNT15Q8N3T1 639 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ANKRD52Q8NB46 1076 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FBXL13Q8NEE6 735 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DQX1Q8TE96 717 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 WFIKKN2Q8TEU8 576 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KLK6Q92876 244 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TMA16Q96EY4 203 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SERAC1Q96JX3 654 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MRGPRX3Q96LB0 322 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ELF4Q99607 663 aaPredicted RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RSPH9Q9H1X1 276 aaPredicted RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NEUROG2Q9H2A3 272 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RAB20Q9NX57 234 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TJP2Q9UDY2 1190 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SLCO3A1Q9UIG8 710 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PLA2G4CQ9UP65 541 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TRAF3IP3Q9Y228 551 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HPSEQ9Y251 543 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ZNF510Q9Y2H8 683 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HBS1LQ9Y450 684 aaKnown RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PCDHB1Q9Y5F3 818 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PCDHGB2Q9Y5G2 931 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AK5Q9Y6K8 562 aa6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 COL27A1Q8IZC6 1860 aaPredicted RBP6.22□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SYNJ2BP-COX16A0A087WUM0 186 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 A0A1W2PPC4 97 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TRIM38O00635 465 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NPC1O15118 1278 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VILLO15195 856 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CASC3O15234 703 aaKnown RBP6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 BNIP3LO60238 219 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RHOBTB3O94955 611 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 IL1BP01584 269 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LTFP02788 710 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ITGAVP06756 1048 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 EPB41P11171 864 aaKnown RBP6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PLA2G2AP14555 144 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 JUPP14923 745 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PDGFRAP16234 1089 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MZF1P28698 734 aaPredicted RBP6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DRD3P35462 400 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBX4P57082 545 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RACK1P63244 317 aaKnown RBP6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 BNIP3Q12983 259 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ADAM9Q13443 819 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 INAVAQ3KP66 663 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PKDCCQ504Y2 493 aa6.21□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DCAF6Q58WW2 860 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms