RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 CIPCQ9C0C6 399 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 OSBPL2Q9H1P3 480 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 SEMA4AQ9H3S1 761 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 RETREG1Q9H6L5 497 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 NHEJ1Q9H9Q4 299 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 POLMQ9NP87 494 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 PRMT8Q9NR22 394 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ABCB8Q9NUT2 735 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 ZSCAN32Q9NX65 697 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CALCOCO1Q9P1Z2 691 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 GGA2Q9UJY4 613 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 VANGL2Q9ULK5 521 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 CLEC4EQ9ULY5 219 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 MMP17Q9ULZ9 603 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 PTPRDP23468 1912 aa9.17□□□□□ -0.94
COL8A1-203ENST00000452013 DOCK8Q8NF50 2099 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CCDC163A0A0D9SF12 145 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 A0A1B0GVM2 712 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 TCAF2A6NFQ2 919 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 NRDCO43847 1150 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 SRGAP2O75044 1071 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 APBB3O95704 486 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 ASLP04424 464 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 H2AFZP0C0S5 128 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 HLA-FP30511 346 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CNR2P34972 360 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 SGSHP51688 502 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 ATXN1P54253 815 aaKnown RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 GALCP54803 685 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CDH4P55283 916 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 HDAC4P56524 1084 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 ST8SIA6P61647 398 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 MESP2Q0VG99 397 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CRY1Q16526 586 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 C5orf22Q49AR2 442 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 DNTTIP2Q5QJE6 756 aaKnown RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 SH3PXD2AQ5TCZ1 1133 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 MBLAC2Q68D91 279 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 RNF43Q68DV7 783 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 PKN3Q6P5Z2 889 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 TSSK4Q6SA08 328 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 H2AFVQ71UI9 128 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 C14orf80Q86SX3 495 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 LONP2Q86WA8 852 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CCAR2Q8N163 923 aaKnown RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 TSTD1Q8NFU3 115 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 FNIP1Q8TF40 1166 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CTNNBL1Q8WYA6 563 aaPredicted RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 NTAN1Q96AB6 310 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 P2RY11Q96G91 374 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 PRICKLE1Q96MT3 831 aaPredicted RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 CHP1Q99653 195 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 THAP10Q9P2Z0 257 aaPredicted RBP9.16□□□□□ -0.94
COL8A1-203ENST00000452013 OR12D3Q9UGF7 316 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 SUN2Q9UH99 717 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 RAPGEFL1Q9UHV5 662 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 LCMT1Q9UIC8 334 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 PCDHGA2Q9Y5H1 932 aa9.16□□□□□ -0.94
COL8A1-203ENST00000452013 UQCRHLA0A096LP55 91 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 E9PAM4 449 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 K7ESF4 209 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 KIF2AO00139 706 aaPredicted RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 SGK1O00141 431 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 MYO1FO00160 1098 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 CCP110O43303 1012 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 SYNCRIPO60506 623 aaKnown RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 CYP1A2P05177 515 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 UQCRHP07919 91 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 DLDP09622 509 aaKnown RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 CD70P32970 193 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 NNMTP40261 264 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 PLK1P53350 603 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 GSDMDP57764 484 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 NRG1Q02297 640 aaPredicted RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 SULT2A1Q06520 285 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 LMAN2Q12907 356 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 BYSLQ13895 437 aaKnown RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 PIGHQ14442 188 aaPredicted RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 STARD3Q14849 445 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 ASTE1Q2TB18 679 aaPredicted RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 EFHC2Q5JST6 749 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 EGFLAMQ63HQ2 1017 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 ADIPOR2Q86V24 386 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 WDR5BQ86VZ2 330 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 DNAAF5Q86Y56 855 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 SFTPA1Q8IWL2 248 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 TC2NQ8N9U0 490 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 ZBTB44Q8NCP5 570 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 NELL1Q92832 810 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 IGSF8Q969P0 613 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 TTC17Q96AE7 1141 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 FAM122AQ96E09 287 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 MYEOVQ96EZ4 313 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 ZYG11BQ9C0D3 744 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 THAP2Q9H0W7 228 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 ANLNQ9NQW6 1124 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 KCND1Q9NSA2 647 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 DONSONQ9NYP3 566 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms