RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GPR174Q9BXC1 333 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 NAA15Q9BXJ9 866 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 SEPT11Q9NVA2 429 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 SLC12A6Q9UHW9 1150 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 PLA2G4CQ9UP65 541 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 DOCK4Q8N1I0 1966 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 KCNU1A8MYU2 1149 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 NPC1O15118 1278 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 FOXD2O60548 495 aaPredicted RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 PDGFRAP16234 1089 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 MAOBP27338 520 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 CD6P30203 668 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 CCR1P32246 355 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 STK19P49842 368 aaPredicted RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 IRAK1P51617 712 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 SNX16P57768 344 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 ST8SIA6P61647 398 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 IRX4P78413 519 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 UBXN1Q04323 297 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 PTPRNQ16849 979 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 OTUD1Q5VV17 481 aaPredicted RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 BEND5Q7L4P6 421 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 SLC26A9Q7LBE3 791 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 ERICH1Q86X53 443 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 XYLT1Q86Y38 959 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 SYT12Q8IV01 421 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 APCDD1Q8J025 514 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP54-207ENST00000451492 NEK11Q8NG66 645 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 OR2T3Q8NH03 318 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 TOE1Q96GM8 510 aaKnown RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 RPL10LQ96L21 214 aaKnown RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 RPRD1AQ96P16 312 aaPredicted RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 TBCBQ99426 244 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 STK33Q9BYT3 514 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 SIK2Q9H0K1 926 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 MIR1-1HGQ9H1L0 117 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 METTL5Q9NRN9 209 aaKnown RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 TMPRSS4Q9NRS4 437 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 PIGVQ9NUD9 493 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP54-207ENST00000451492 ASNSD1Q9NWL6 643 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP54-207ENST00000451492 INTS6Q9UL03 887 aaKnown RBP10.01□□□□□ -0.81
USP54-207ENST00000451492 VANGL2Q9ULK5 521 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 SNX10Q9Y5X0 201 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 NUMA1Q14980 2115 aa10.01□□□□□ -0.81
USP54-207ENST00000451492 MOCS3O95396 460 aa10□□□□□ -0.81
USP54-207ENST00000451492 GJB6O95452 261 aa10□□□□□ -0.81
USP54-207ENST00000451492 DNTTP04053 509 aa10□□□□□ -0.81
USP54-207ENST00000451492 GLI1P08151 1106 aa10□□□□□ -0.81
USP54-207ENST00000451492 DLDP09622 509 aaKnown RBP10□□□□□ -0.81
USP54-207ENST00000451492 ATP1A3P13637 1013 aa10□□□□□ -0.81
USP54-207ENST00000451492 ENGP17813 658 aa10□□□□□ -0.81
USP54-207ENST00000451492 NOS2P35228 1153 aa10□□□□□ -0.81
USP54-207ENST00000451492 SOX5P35711 763 aa10□□□□□ -0.81
USP54-207ENST00000451492 MATKP42679 507 aa10□□□□□ -0.81
USP54-207ENST00000451492 TPMTP51580 245 aa10□□□□□ -0.81
USP54-207ENST00000451492 NOMO3P69849 1222 aa10□□□□□ -0.81
USP54-207ENST00000451492 FOXK2Q01167 660 aa10□□□□□ -0.81
USP54-207ENST00000451492 DEUP1Q05D60 604 aa10□□□□□ -0.81
USP54-207ENST00000451492 ENPP2Q13822 863 aa10□□□□□ -0.81
USP54-207ENST00000451492 E2F5Q15329 346 aa10□□□□□ -0.81
USP54-207ENST00000451492 CDO1Q16878 200 aa10□□□□□ -0.81
USP54-207ENST00000451492 MPP7Q5T2T1 576 aa10□□□□□ -0.81
USP54-207ENST00000451492 DCAF12L1Q5VU92 463 aa10□□□□□ -0.81
USP54-207ENST00000451492 RNF219Q5W0B1 726 aaPredicted RBP10□□□□□ -0.81
USP54-207ENST00000451492 KIAA0907Q7Z7F0 614 aaPredicted RBP10□□□□□ -0.81
USP54-207ENST00000451492 CCAR2Q8N163 923 aaKnown RBP10□□□□□ -0.81
USP54-207ENST00000451492 EMC1Q8N766 993 aa10□□□□□ -0.81
USP54-207ENST00000451492 MSANTD4Q8NCY6 345 aa10□□□□□ -0.81
USP54-207ENST00000451492 OR2I1PQ8NGU4 316 aa10□□□□□ -0.81
USP54-207ENST00000451492 SLC30A5Q8TAD4 765 aa10□□□□□ -0.81
USP54-207ENST00000451492 FIBINQ8TAL6 211 aa10□□□□□ -0.81
USP54-207ENST00000451492 GANCQ8TET4 914 aa10□□□□□ -0.81
USP54-207ENST00000451492 DDX1Q92499 740 aaKnown RBP10□□□□□ -0.81
USP54-207ENST00000451492 IGSF8Q969P0 613 aa10□□□□□ -0.81
USP54-207ENST00000451492 AZIN2Q96A70 460 aa10□□□□□ -0.81
USP54-207ENST00000451492 C18orf8Q96DM3 657 aa10□□□□□ -0.81
USP54-207ENST00000451492 CFAP57Q96MR6 1250 aa10□□□□□ -0.81
USP54-207ENST00000451492 C11orf70Q9BRQ4 267 aa10□□□□□ -0.81
USP54-207ENST00000451492 TKTL2Q9H0I9 626 aa10□□□□□ -0.81
USP54-207ENST00000451492 TMEM245Q9H330 911 aa10□□□□□ -0.81
USP54-207ENST00000451492 TMEM9BQ9NQ34 198 aa10□□□□□ -0.81
USP54-207ENST00000451492 WSB2Q9NYS7 404 aaPredicted RBP10□□□□□ -0.81
USP54-207ENST00000451492 USP36Q9P275 1121 aaKnown RBP10□□□□□ -0.81
USP54-207ENST00000451492 PILRBQ9UKJ0 227 aa10□□□□□ -0.81
USP54-207ENST00000451492 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
USP54-207ENST00000451492 ERVW-1Q9UQF0 538 aa10□□□□□ -0.81
USP54-207ENST00000451492 SIK3Q9Y2K2 1263 aa10□□□□□ -0.81
USP54-207ENST00000451492 HS3ST4Q9Y661 456 aa10□□□□□ -0.81
USP54-207ENST00000451492 FAM47DPA6NHR8 397 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 LGALS16A8MUM7 142 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 TTC34A8MYJ7 566 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 TIMM44O43615 452 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms