RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MANEALQ5VSG8 457 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 RNF43Q68DV7 783 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 PEX26Q7Z412 305 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-202ENST00000451053 LRRC57Q8N9N7 239 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 RPRD1AQ96P16 312 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-202ENST00000451053 KCTD15Q96SI1 283 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-202ENST00000451053 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-202ENST00000451053 DHX35Q9H5Z1 703 aaKnown RBP13.45□□□□□ -0.26
VPS33A-202ENST00000451053 AMFRQ9UKV5 643 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 NEU3Q9UQ49 428 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 ALG6Q9Y672 507 aa13.45□□□□□ -0.26
VPS33A-202ENST00000451053 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 MIF4GDA9UHW6 222 aaKnown RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 TRIM24O15164 1050 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 CREB3O43889 395 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 TULP3O75386 442 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 CNTN5O94779 1100 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 LRIG2O94898 1065 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 RARAP10276 462 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 GLULP15104 373 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 NRG1Q02297 640 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 PRKCQQ04759 706 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 KDSRQ06136 332 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 SIGLEC14Q08ET2 396 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 SEMA3BQ13214 749 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 PON2Q15165 354 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 HADHQ16836 314 aaKnown RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 C5orf22Q49AR2 442 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 BOLA3Q53S33 107 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 ALFQ53S48 1182 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 ACBD5Q5T8D3 534 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 ASTLQ6HA08 431 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 LRRC31Q6UY01 552 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 TRIM67Q6ZTA4 783 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 PHTF2Q8N3S3 785 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 WFDC5Q8TCV5 224 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 HSPH1Q92598 858 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 WDR24Q96S15 920 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 P2RY13Q9BPV8 354 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 FBRSL1Q9HCM7 1045 aaKnown RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 DNAJC17Q9NVM6 304 aaKnown RBP13.44□□□□□ -0.26
VPS33A-202ENST00000451053 MPP6Q9NZW5 540 aa13.44□□□□□ -0.26
VPS33A-202ENST00000451053 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 TYW5A2RUC4 315 aaKnown RBP13.43□□□□□ -0.26
VPS33A-202ENST00000451053 DRGXA6NNA5 263 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 PI4K2BG5E9Z4 385 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 TNFRSF10AO00220 468 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 SPOPO43791 374 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 PDGFBP01127 241 aaPredicted RBP13.43□□□□□ -0.26
VPS33A-202ENST00000451053 CISD3P0C7P0 127 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 ALADP13716 330 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 L1CAMP32004 1257 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 GALK1P51570 392 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 STARD6P59095 220 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 MPP7Q5T2T1 576 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 MEI1Q5TIA1 1274 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 PSTKQ8IV42 348 aaKnown RBP13.43□□□□□ -0.26
VPS33A-202ENST00000451053 CARNMT1Q8N4J0 409 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 TEKT4Q8WW24 435 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 FAM3CQ92520 227 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 ZNF592Q92610 1267 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 CD101Q93033 1021 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 TBC1D31Q96DN5 1066 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 MSANTD3Q96H12 275 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 XPO6Q96QU8 1125 aaKnown RBP13.43□□□□□ -0.26
VPS33A-202ENST00000451053 TBC1D17Q9HA65 648 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 KLHL11Q9NVR0 708 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 FBXO10Q9UK96 956 aa13.43□□□□□ -0.26
VPS33A-202ENST00000451053 A0A1B0GVM2 712 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 TCAF2A6NFQ2 919 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 MAN2B1O00754 1011 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 LUC7L3O95232 432 aaKnown RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 EIF2DP41214 584 aaKnown RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 DGKGP49619 791 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 CDH4P55283 916 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 AMPD2Q01433 879 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 RPS6KA1Q15418 735 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 DPYSL2Q16555 572 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 PPP6R3Q5H9R7 873 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 FSCBQ5H9T9 825 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 TTC39BQ5VTQ0 682 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 GRAMD4Q6IC98 578 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 FSTL4Q6MZW2 842 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 RWDD4Q6NW29 188 aaKnown RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 ZNF852Q6ZMS4 543 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 CHST9Q7L1S5 443 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 POLNQ7Z5Q5 900 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 TFAP2DQ7Z6R9 452 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 MFN1Q8IWA4 741 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 SFTPA1Q8IWL2 248 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 UBL4BQ8N7F7 174 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 EZH1Q92800 747 aaPredicted RBP13.42□□□□□ -0.26
VPS33A-202ENST00000451053 SHDQ96IW2 340 aa13.42□□□□□ -0.26
VPS33A-202ENST00000451053 PNKPQ96T60 521 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms