RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TNIP3Q96KP6 325 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 DUSP23Q9BVJ7 150 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 ABCB8Q9NUT2 735 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 NLGN3Q9NZ94 848 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 FBN2P35556 2912 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 CCDC187A0A096LP49 1063 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 LY6G6EA0A0G2JKS1 128 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 VWA3AA6NCI4 1184 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 SIN3BO75182 1162 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 PPP1R37O75864 691 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 RALAP11233 206 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 PABPC1P11940 636 aaKnown RBP13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 POLR2EP19388 210 aaKnown RBP13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 NUDT1P36639 197 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 ADPRHP54922 357 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 BECN1Q14457 450 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 CBWD1Q9BRT8 395 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 STRA6Q9BX79 667 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 NAGPAQ9UK23 515 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 DMTF1Q9Y222 760 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 PCDHGA7Q9Y5G6 932 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 U3KQA8 63 aa13.12□□□□□ -0.31
AC004540.1-204ENST00000449537 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 SLC26A4O43511 780 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 TCEA3O75764 348 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 DDIT3P35638 169 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 PSEN1P49768 467 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 PPP2CBP62714 309 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 PPP2CAP67775 309 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 CYP4F2P78329 520 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 MANEAQ5SRI9 462 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 JAMLQ86YT9 394 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 BLOC1S4Q9NUP1 217 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 RASAL2Q9UJF2 1139 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 GGA2Q9UJY4 613 aa13.11□□□□□ -0.31
AC004540.1-204ENST00000449537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 PRAMEF26H0Y7S4 382 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 K7ESM1 405 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 SCAMP1O15126 338 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 PIAS2O75928 621 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 MAT2AP31153 395 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 KCNMA1Q12791 1236 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 EFEMP1Q12805 493 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 ZNF177Q13360 481 aaPredicted RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 CDKN3Q16667 212 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 EFL1Q7Z2Z2 1120 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 SCD5Q86SK9 330 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 ATCAYQ86WG3 371 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 WDR49Q8IV35 697 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 FAM217AQ8IXS0 508 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 AADATQ8N5Z0 425 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 RAD54LQ92698 747 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 FUCA2Q9BTY2 467 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
AC004540.1-204ENST00000449537 ZFC3H1O60293 1989 aaKnown RBP13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 SLC12A8A0AV02 714 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 PLD2O14939 933 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 AGFG2O95081 481 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 LIPCP11150 499 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 CCDC130P13994 396 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 C5AR1P21730 350 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 UBA7P41226 1012 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 KCNAB2Q13303 367 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 TRPC3Q13507 836 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 POM121L1PQ3SYA9 428 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 C9orf64Q5T6V5 341 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 ACOT1Q86TX2 421 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 FBXO39Q8N4B4 442 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 JAKMIP2Q96AA8 810 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms