RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 CIPCQ9C0C6 399 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 KCNF1Q9H3M0 494 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 POMKQ9H5K3 350 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TUBE1Q9UJT0 475 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 FBXO10Q9UK96 956 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 MKL2Q9ULH7 1088 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CARNS1A5YM72 827 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CLK2P49760 499 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TKTL1P51854 596 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TBX4P57082 545 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CDC42P60953 191 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 RAB2AP61019 212 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CREMQ03060 361 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 FASTKQ14296 549 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 MTDHQ86UE4 582 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 KCNMB4Q86W47 210 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 ZNF557Q8N988 423 aaPredicted RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 C9orf16Q9BUW7 83 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 EPB41L4BQ9H329 900 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 COMMD9Q9P000 198 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CRNNQ9UBG3 495 aaPredicted RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 DIP2CQ9Y2E4 1556 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 UBE2QL1A1L167 161 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 H3BN98 237 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 MSH4O15457 936 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 NDUFS2O75306 463 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 SERPINE1P05121 402 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 COX7A2P14406 83 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CCR1P32246 355 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 RPL9P32969 192 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 COPZ1P61923 177 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 MKRN4PQ13434 485 aaPredicted RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TC2NQ8N9U0 490 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 ACTRT1Q8TDG2 376 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 IGDCC4Q8TDY8 1250 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 RORBQ92753 470 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 ERGIC2Q96RQ1 377 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TARS2Q9BW92 718 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 MROH8Q9H579 483 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TRHDEQ9UKU6 1024 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 PHRF1Q9P1Y6 1649 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 NRXN3Q9Y4C0 1643 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 A0A0G2JLW4 131 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 KHDRBS3O75525 346 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 CYP11B1P15538 503 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 ALOX12P18054 663 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TLX1P31314 330 aaPredicted RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 HNRNPH1P31943 449 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 SCTRP47872 440 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 KCNJ1P48048 391 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 STK4Q13043 487 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 BIKQ13323 160 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 XRCC4Q13426 336 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TSC22D1Q15714 1073 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 TRMT5Q32P41 509 aaKnown RBP6.3□□□□□ -1.4
PCDH15-219ENST00000448885 RETSATQ6NUM9 610 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 RD3Q7Z3Z2 195 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 SYT12Q8IV01 421 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 AGBL3Q8NEM8 1001 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 HIC2Q96JB3 615 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 SH2D3AQ9BRG2 576 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 PIF1Q9H611 641 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 PRDM16Q9HAZ2 1276 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 MID1IP1Q9NPA3 183 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 SNX6Q9UNH7 406 aa6.3□□□□□ -1.4
PCDH15-219ENST00000448885 WDR27A2RRH5 827 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 PPP1R3GB7ZBB8 358 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 ENDOD1O94919 500 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 GHRP10912 638 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 RASA1P20936 1047 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 MMP14P50281 582 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 SCNN1BP51168 640 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 CORO7P57737 925 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 NAA20P61599 178 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 RBBP4Q09028 425 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 PCNX4Q63HM2 1172 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 ZFP1Q6P2D0 407 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 KIAA0408Q6ZU52 694 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 CXorf40AQ8TE69 158 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 CENPIQ92674 756 aaPredicted RBP6.29□□□□□ -1.4
PCDH15-219ENST00000448885 SMARCD1Q96GM5 515 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 MPP4Q96JB8 637 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
PCDH15-219ENST00000448885 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 CD248Q9HCU0 757 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 GSTK1Q9Y2Q3 226 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 SPATA31D1Q6ZQQ2 1576 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 PARNO95453 639 aaKnown RBP6.29□□□□□ -1.4
PCDH15-219ENST00000448885 LDLRP01130 860 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 LTFP02788 710 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 GYPCP04921 128 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 DGKAP23743 735 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
PCDH15-219ENST00000448885 ARHGDIBP52566 201 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 KCNMA1Q12791 1236 aa6.29□□□□□ -1.4
PCDH15-219ENST00000448885 PPM1LQ5SGD2 360 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms