RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 EXOC4Q96A65 974 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 PRR11Q96HE9 360 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SPATA32Q96LK8 384 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 ADNPQ9H2P0 1102 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 LINC00597Q9H2U6 94 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 ENTPD4Q9Y227 616 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 NOP58Q9Y2X3 529 aaKnown RBP5.43□□□□□ -1.54
SDCBP-205ENST00000447267 UBIAD1Q9Y5Z9 338 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 SLC12A7Q9Y666 1083 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 PMF1-BGLAPU3KQ54 211 aa5.43□□□□□ -1.54
SDCBP-205ENST00000447267 MYLKQ15746 1914 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 LRRK1Q38SD2 2015 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 NPHP3-ACAD11A0A0J9YXS1 232 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KCNAB3O43448 404 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KCNH1O95259 989 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 WNT1P04628 370 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 ITGAVP06756 1048 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 PLS3P13797 630 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 GABRR2P28476 465 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KCNC1P48547 511 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 LTBQ06643 244 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 ITGB3BPQ13352 177 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-205ENST00000447267 MRPL49Q13405 166 aaKnown RBP5.42□□□□□ -1.54
SDCBP-205ENST00000447267 INAVAQ3KP66 663 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 CC2D1AQ6P1N0 951 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KANSL1Q7Z3B3 1105 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 HOMER1Q86YM7 354 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 CPA6Q8N4T0 437 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 SAMD3Q8N6K7 520 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 NETO2Q8NC67 525 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 CCDC26Q8TAB7 109 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 USP13Q92995 863 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-205ENST00000447267 IGSF8Q969P0 613 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 TOE1Q96GM8 510 aaKnown RBP5.42□□□□□ -1.54
SDCBP-205ENST00000447267 CDHR1Q96JP9 859 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 MRGPRX3Q96LB0 322 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 NAPBQ9H115 298 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 CXCL16Q9H2A7 254 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 TASP1Q9H6P5 420 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 UBN1Q9NPG3 1134 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KCNH7Q9NS40 1196 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 AGPAT5Q9NUQ2 364 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KCND3Q9UK17 655 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 DUSP10Q9Y6W6 482 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 ARHGEF17Q96PE2 2063 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-205ENST00000447267 PTPRDP23468 1912 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 STAB1Q9NY15 2570 aa5.42□□□□□ -1.54
SDCBP-205ENST00000447267 KNL1Q8NG31 2342 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 MYH6P13533 1939 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 ANKRD34BA5PLL1 514 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CDRT15L2A8MXV6 281 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 B2RBV5 119 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 BTBD18B2RXH4 712 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 ZBTB5O15062 677 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 ZNF217O75362 1048 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 C4BPAP04003 597 aaKnown RBP5.41□□□□□ -1.54
SDCBP-205ENST00000447267 FUCA1P04066 466 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 THBDP07204 575 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CKMT2P17540 419 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 PAMP19021 973 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 NR1D1P20393 614 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CD6P30203 668 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 BRCC3P46736 316 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 KRTAP10-9P60411 292 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CYP4A11Q02928 519 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 PDGFRLQ15198 375 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 SHBQ15464 509 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 SLC35G1Q2M3R5 365 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CCDC184Q52MB2 194 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 ARHGAP15Q53QZ3 475 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 WWC2Q6AWC2 1192 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 GTF2IRD2BQ6EKJ0 949 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 SLC8B1Q6J4K2 584 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 ZSCAN25Q6NSZ9 544 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CD300LGQ6UXG3 332 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 GTF2IRD2Q86UP8 949 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 GGNQ86UU5 652 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 FERMT3Q86UX7 667 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 RHPN2Q8IUC4 686 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 CMTM8Q8IZV2 173 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 C9orf43Q8TAL5 461 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-205ENST00000447267 FRS2Q8WU20 508 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 PIBF1Q8WXW3 757 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 SNX19Q92543 992 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 NLRP4Q96MN2 994 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 MTMR9Q96QG7 549 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 PIGSQ96S52 555 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 SEC62Q99442 399 aaKnown RBP5.41□□□□□ -1.54
SDCBP-205ENST00000447267 SDF4Q9BRK5 362 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 NXF3Q9H4D5 531 aaKnown RBP5.41□□□□□ -1.54
SDCBP-205ENST00000447267 MINDY3Q9H8M7 445 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 DUS2Q9NX74 493 aaKnown RBP5.41□□□□□ -1.54
SDCBP-205ENST00000447267 TMEFF2Q9UIK5 374 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-205ENST00000447267 FBXL7Q9UJT9 491 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 EXOC6BQ9Y2D4 811 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 NFASCO94856 1347 aa5.41□□□□□ -1.54
SDCBP-205ENST00000447267 EVPLQ92817 2033 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 A0A1B0GTQ1 180 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 A0A1W2PQF6 199 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 K7EM74 188 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms