RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 SOX13Q9UN79 622 aa19.46■□□□□ 0.71
PAXBP1-204ENST00000443785 SSC5DA1L4H1 1573 aa19.46■□□□□ 0.71
PAXBP1-204ENST00000443785 LYNP07948 512 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 MCF2P10911 925 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 GNL1P36915 607 aaPredicted RBP19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 COPAP53621 1224 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 DLG1Q12959 904 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 PAN2Q504Q3 1202 aaKnown RBP19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 IRGCQ6NXR0 463 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 PLPPR4Q7Z2D5 763 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 ZNF567Q8N184 647 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 RNF169Q8NCN4 708 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 ECSITQ9BQ95 431 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 TUBB6Q9BUF5 446 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 RHOBTB2Q9BYZ6 727 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 CHRAC1Q9NRG0 131 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 H3BRB1 525 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 TK2O00142 265 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 ACTR3P61158 418 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 DSG1Q02413 1049 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 PIGZQ86VD9 579 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 SORT1Q99523 831 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 TUT1Q9H6E5 874 aaKnown RBP19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 CYP3A43Q9HB55 503 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 ANLNQ9NQW6 1124 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 ANGPTL2Q9UKU9 493 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 SLC39A10Q9ULF5 831 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 SNNO75324 88 aaPredicted RBP19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 RECQL4O94761 1208 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 SERPINA6P08185 405 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 MPSTP25325 297 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 PAPOLAP51003 745 aaKnown RBP19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 BIRC2Q13490 618 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 ZNF280DQ6N043 979 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 PAOXQ6QHF9 649 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 SLC7A14Q8TBB6 771 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 MED10Q9BTT4 135 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 COG4Q9H9E3 785 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 SNX15Q9NRS6 342 aa19.45■□□□□ 0.7
PAXBP1-204ENST00000443785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 TRDMT1O14717 391 aaKnown RBP19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 OR6B1O95007 311 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 RAG1P15918 1043 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 CPOXP36551 454 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 ZNF670Q9BS34 389 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 NUF2Q9BZD4 464 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 CAPN8A6NHC0 703 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 FZD9O00144 591 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 HNRNPCL1O60812 293 aaKnown RBP19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 PRKCGP05129 697 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 MAP3K7CLP57077 242 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 EFHC1Q5JVL4 640 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 SCYL1Q96KG9 808 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 ASB7Q9H672 318 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 IARS2Q9NSE4 1012 aaKnown RBP19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 MOCS1Q9NZB8 636 aa19.44■□□□□ 0.7
PAXBP1-204ENST00000443785 A0A0A0MRY4 1105 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 TMEM233B4DJY2 109 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 JUNP05412 331 aaKnown RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 CPA3P15088 417 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 NELFEP18615 380 aaKnown RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 TBL3Q12788 808 aaKnown RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 TUBB3Q13509 450 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 ITGA7Q13683 1181 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 ACAP1Q15027 740 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 PDCD2Q16342 344 aaPredicted RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 RNF135Q8IUD6 432 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 TTC16Q8NEE8 873 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 CDKL2Q92772 493 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 ZFP42Q96MM3 310 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 SPATA13Q96N96 652 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 KCNK16Q96T55 309 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 SLC4A5Q9BY07 1137 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 SNX25Q9H3E2 840 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 LCTP09848 1927 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 MEIS3P2A8K0S8 358 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 PPP1R12AO14974 1030 aaPredicted RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 NUDT2P50583 147 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 SOX4Q06945 474 aaPredicted RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 ARHGAP1Q07960 439 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 GK3PQ14409 553 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 TMEM110Q86TL2 294 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 TRIM42Q8IWZ5 723 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 GDPD5Q8WTR4 605 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 RNF139Q8WU17 664 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 PNPLA8Q9NP80 782 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 ZNF212Q9UDV6 495 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 ZNF180Q9UJW8 692 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 NUDT5Q9UKK9 219 aa19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 PIN4Q9Y237 131 aaKnown RBP19.43■□□□□ 0.7
PAXBP1-204ENST00000443785 SRGAP2BP0DMP2 458 aa19.42■□□□□ 0.7
PAXBP1-204ENST00000443785 SOX11P35716 441 aa19.42■□□□□ 0.7
PAXBP1-204ENST00000443785 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
PAXBP1-204ENST00000443785 TNFAIP2Q03169 654 aa19.42■□□□□ 0.7
PAXBP1-204ENST00000443785 INCA1Q0VD86 236 aa19.42■□□□□ 0.7
PAXBP1-204ENST00000443785 CCNIQ14094 377 aa19.42■□□□□ 0.7
PAXBP1-204ENST00000443785 MTHFD1LQ6UB35 978 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms