RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NAMPTP43490 491 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 TM4SF4P48230 202 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 ACOT2P49753 483 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 RAB15P59190 212 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 EMC2Q15006 297 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 SMTNL2Q2TAL5 461 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 XKR3Q5GH77 459 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 FSCBQ5H9T9 825 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 C6orf52Q5T4I8 152 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 NCCRP1Q6ZVX7 275 aaPredicted RBP12.21□□□□□ -0.46
LTBR-203ENST00000441074 AMIGO2Q86SJ2 522 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 RSPH3Q86UC2 560 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 RFX6Q8HWS3 928 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 IFNL1Q8IU54 200 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 TRPC4APQ8TEL6 797 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 PPP4R1Q8TF05 950 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 SLC35B4Q969S0 331 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 PHF12Q96QT6 1004 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 PPP1R16BQ96T49 567 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 SERPINI1Q99574 410 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 GPR20Q99678 358 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 SLX1AQ9BQ83 275 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 TRIM56Q9BRZ2 755 aaKnown RBP12.21□□□□□ -0.46
LTBR-203ENST00000441074 MROH8Q9H579 483 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 NUB1Q9Y5A7 615 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 PTPRJQ12913 1337 aa12.21□□□□□ -0.46
LTBR-203ENST00000441074 NOP56O00567 594 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 ZNF195O14628 629 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 SERPINE1P05121 402 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 EDN1P05305 212 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 PSMA2P25787 234 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 ALDH3B2P48448 385 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 ACADVLP49748 655 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 NRLP54845 237 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 CDKL1Q00532 357 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 ROR1Q01973 937 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 SEZ6Q53EL9 994 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 KCNT1Q5JUK3 1230 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 MROH9Q5TGP6 573 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 METTL7BQ6UX53 244 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 IFNLR1Q8IU57 520 aaPredicted RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 PHTF2Q8N3S3 785 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 ARFGAP1Q8N6T3 406 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 TSPAN14Q8NG11 270 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 SPATA18Q8TC71 538 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 MSTO1Q9BUK6 570 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 PNPOQ9NVS9 261 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 BCAP29Q9UHQ4 241 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 TDRKHQ9Y2W6 561 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 MKI67P46013 3256 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 LRRIQ4A6NIV6 560 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 FAM159BA6NKW6 160 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 LRCH4O75427 683 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 THRAP10827 490 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 GRK2P25098 689 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 WNT7BP56706 349 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 RPL10AP62906 217 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 PEX6Q13608 980 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 SPIDRQ14159 915 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 CELF3Q5SZQ8 465 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 DEPTORQ8TB45 409 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 SEPT1Q8WYJ6 367 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 LRRC39Q96DD0 335 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 ZBTB45Q96K62 511 aaPredicted RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 KLC2Q9H0B6 622 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 RRN3Q9NYV6 651 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 CNOT11Q9UKZ1 510 aaKnown RBP12.2□□□□□ -0.46
LTBR-203ENST00000441074 SQORQ9Y6N5 450 aa12.2□□□□□ -0.46
LTBR-203ENST00000441074 KIAA1217Q5T5P2 1943 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 IGKV6D-21A0A0A0MT36 114 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 BOLA2-SMG1P6H3BVE0 249 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 TRPA1O75762 1119 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 ZNF189O75820 626 aaPredicted RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 ZMPSTE24O75844 475 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 NUP107P57740 925 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 IGBP1P78318 339 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 KLF10Q13118 480 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 SYCP2LQ5T4T6 812 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 LPCAT2Q7L5N7 544 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 GPR142Q7Z601 462 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 DPP9Q86TI2 863 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 CAND1Q86VP6 1230 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 TRIML2Q8N7C3 387 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 ACMSDQ8TDX5 336 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 FNIP1Q8TF40 1166 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 SORT1Q99523 831 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 CCT7Q99832 543 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 RNPEPQ9H4A4 650 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 COPS7BQ9H9Q2 264 aaPredicted RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 RAB6BQ9NRW1 208 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms