RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 PPP3CCP48454 512 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 PIK3CGP48736 1102 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 CREMQ03060 361 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 PTP4A2Q12974 167 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 TP53BP2Q13625 1128 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 DNAAF5Q86Y56 855 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 HS6ST3Q8IZP7 471 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 STK40Q8N2I9 435 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 PRELID2Q8N945 189 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 CASP10Q92851 521 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 VPS33AQ96AX1 596 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 PPP1R10Q96QC0 940 aaKnown RBP6.54□□□□□ -1.36
CNOT1-202ENST00000441024 ULBP1Q9BZM6 244 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 RAD18Q9NS91 495 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 MPP6Q9NZW5 540 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 RCCD1A6NED2 376 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 H3BMM5 538 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 PPP1R11O60927 126 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-202ENST00000441024 FSBPO95073 299 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 APOA1P02647 267 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 ZNF7P17097 686 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-202ENST00000441024 RBL1P28749 1068 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 CSE1LP55060 971 aaKnown RBP6.54□□□□□ -1.36
CNOT1-202ENST00000441024 IFI35P80217 286 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-202ENST00000441024 CHRNB3Q05901 458 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 FAAP100Q0VG06 881 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 CNTN1Q12860 1018 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 MAP2K5Q13163 448 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 BMPR2Q13873 1038 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 CSHL1Q14406 222 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 FAM183BPQ6ZVS7 135 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 IFNEQ86WN2 208 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 TTC30AQ86WT1 665 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 TMEM139Q8IV31 216 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 IL31RAQ8NI17 732 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 THAP11Q96EK4 314 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 NRDE2Q9H7Z3 1164 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 DYRK1BQ9Y463 629 aa6.54□□□□□ -1.36
CNOT1-202ENST00000441024 LAMA4Q16363 1823 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 A0A096LPK6 155 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 A0A0B4J269 797 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 TMEM114B3SHH9 223 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 SKAP2O75563 359 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 NFICP08651 508 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 MYL4P12829 197 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 MZF1P28698 734 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 SSTR1P30872 391 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 SERPINB5P36952 375 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 SKIV2L2P42285 1042 aaKnown RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 IRX1P78414 480 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 AUHQ13825 339 aaKnown RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RNF43Q68DV7 783 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 ZFP1Q6P2D0 407 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RFWD2Q8NHY2 731 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 PPTC7Q8NI37 304 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 KLRG1Q96E93 195 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RMDN2Q96LZ7 410 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 MBOAT7Q96N66 472 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 CCT7Q99832 543 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 SH3GL3Q99963 347 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 FTHL17Q9BXU8 183 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 KLHL4Q9C0H6 718 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.53□□□□□ -1.365e-7■■□□□ 13.8
CNOT1-202ENST00000441024 STN1Q9H668 368 aaKnown RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 TAS2R13Q9NYV9 303 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 SMIM35A0A1B0GVV1 85 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 FCHO1O14526 889 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RAD51BO15315 384 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 ADCY6O43306 1168 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 USP1O94782 785 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 MAP3K6O95382 1288 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 ATP6V1G2O95670 118 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 POMCP01189 267 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 KRT6AP02538 564 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 KRT6BP04259 564 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 CKMP06732 381 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 CCDC130P13994 396 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 CES1P23141 567 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 ACAT1P24752 427 aaKnown RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RXRGP48443 463 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 KRT6CP48668 564 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 POU5F1Q01860 360 aaKnown RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 NFYCQ13952 458 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 TTMPQ5BVD1 217 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 PPP1R15BQ5SWA1 713 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 CENPLQ8N0S6 344 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 OR56A4Q8NGH8 313 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RDH11Q8TC12 318 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 EDEM1Q92611 657 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RCOR3Q9P2K3 495 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 RABGEF1Q9UJ41 708 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 REXO2Q9Y3B8 237 aaKnown RBP6.53□□□□□ -1.36
CNOT1-202ENST00000441024 IPPQ9Y573 584 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 C15orf38-AP3S2A0A0A6YYH1 394 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 TBKBP1A7MCY6 615 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 MYO1GB0I1T2 1018 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 PMM2O15305 246 aa6.53□□□□□ -1.36
CNOT1-202ENST00000441024 BIRC5O15392 142 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms