RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 TADA2BQ86TJ2 420 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 CIR1Q86X95 450 aaPredicted RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 TMC8Q8IU68 726 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 ZNF683Q8IZ20 524 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 CPT1BQ92523 772 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 WBP2Q969T9 261 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 LRRC45Q96CN5 670 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 KLC2Q9H0B6 622 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 GKN1Q9NS71 199 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 SMPD4Q9NXE4 827 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 SEPT10Q9P0V9 454 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 UXTQ9UBK9 157 aaPredicted RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 HBS1LQ9Y450 684 aaKnown RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 MYO18AQ92614 2054 aaKnown RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 TCRBV7S3A2A0A539 114 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 GOLGA8MH3BSY2 632 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 RFPL2O75678 378 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 GABRR2P28476 465 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 UBE3AQ05086 875 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 PDK1Q15118 436 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 CCDC149Q6ZUS6 474 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 TFAP2DQ7Z6R9 452 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 UBLCP1Q8WVY7 318 aaPredicted RBP19.64■□□□□ 0.73
SNX17-203ENST00000440760 HTR3CQ8WXA8 447 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 TGS1Q96RS0 853 aaKnown RBP19.64■□□□□ 0.73
SNX17-203ENST00000440760 CYP2S1Q96SQ9 504 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 TRANK1O15050 2925 aa19.64■□□□□ 0.73
SNX17-203ENST00000440760 SCAMP3O14828 347 aaKnown RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 PPP1R12AO14974 1030 aaPredicted RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 PPFIA2O75334 1257 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 CNTN5O94779 1100 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 GJA1P17302 382 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 SERPINB6P35237 376 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 NRG1Q02297 640 aaPredicted RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 TXNDC8Q6A555 127 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 GAREM2Q75VX8 874 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 BZW1Q7L1Q6 419 aaKnown RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 CHSY1Q86X52 802 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 ZNF276Q8N554 614 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 BBOF1Q8ND07 529 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 IGSF8Q969P0 613 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 P2RY11Q96G91 374 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 C1orf74Q96LT6 269 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 MAN1C1Q9NR34 630 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 HCFC1R1Q9NWW0 138 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 SLC12A6Q9UHW9 1150 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 FARP1Q9Y4F1 1045 aaPredicted RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 PDE4DIPQ5VU43 2346 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 SPDYE4A6NLX3 237 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 HACD1B0YJ81 288 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 KCNK1O00180 336 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 FGF10O15520 208 aaPredicted RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 TMEM63AO94886 807 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 EPCAMP16422 314 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 MTM1Q13496 603 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 ALFQ53S48 1182 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 NUGGCQ68CJ6 796 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 FBXL22Q6P050 247 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 KLHDC10Q6PID8 442 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 ARHGAP36Q6ZRI8 547 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 ARHGAP12Q8IWW6 846 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 PRCCQ92733 491 aaPredicted RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 PRMT1Q99873 361 aaKnown RBP19.63■□□□□ 0.73
SNX17-203ENST00000440760 CORO1BQ9BR76 489 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 LRRC3Q9BY71 257 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 FAM129AQ9BZQ8 928 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 CATSPERBQ9H7T0 1116 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 VIPAS39Q9H9C1 493 aa19.63■□□□□ 0.73
SNX17-203ENST00000440760 RNF103O00237 685 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 DFFAO00273 331 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 PER2O15055 1255 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 LPXNO60711 386 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 STC2O76061 302 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 CAV1Q03135 178 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 GALNT2Q10471 571 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 GPM6BQ13491 265 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 PPM1LQ5SGD2 360 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 STXBP5Q5T5C0 1151 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 RFWD3Q6PCD5 774 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 PDZD4Q76G19 769 aaPredicted RBP19.62■□□□□ 0.73
SNX17-203ENST00000440760 ARL14EPQ8N8R7 260 aaPredicted RBP19.62■□□□□ 0.73
SNX17-203ENST00000440760 ZIM3Q96PE6 472 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 RAB6BQ9NRW1 208 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 PAK5Q9P286 719 aa19.62■□□□□ 0.73
SNX17-203ENST00000440760 KLKB1P03952 638 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 RB1P06400 928 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 MBL2P11226 248 aaPredicted RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 CORO1AP31146 461 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 SLC6A4P31645 630 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 ACTN2P35609 894 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 GARSP41250 739 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 KPNA1P52294 538 aaPredicted RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 PMS2P54278 862 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 MORF4L2Q15014 288 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 DENND1CQ8IV53 801 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 PPIL6Q8IXY8 311 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 RTL3Q8N8U3 475 aaKnown RBP19.61■□□□□ 0.73
SNX17-203ENST00000440760 NAT8LQ8N9F0 302 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 TTC16Q8NEE8 873 aa19.61■□□□□ 0.73
SNX17-203ENST00000440760 OR2W6PQ8NHA6 318 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms