RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PASD1Q8IV76 773 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 UNC45BQ8IWX7 931 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 APCDD1Q8J025 514 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 LGI2Q8N0V4 545 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 IRGQQ8WZA9 623 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 LMLNQ96KR4 655 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 BTBD1Q9H0C5 482 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 TM9SF3Q9HD45 589 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 CEP83Q9Y592 693 aa14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 NYNRINQ9P2P1 1898 aaKnown RBP14.78□□□□□ -0.04
SMARCE1-205ENST00000431889 KNL1Q8NG31 2342 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 A0A1W2PP55 124 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 PLK4O00444 970 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 CAPN9O14815 690 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 MID1O15344 667 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 THAP12O43422 761 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 GRAP2O75791 330 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 AFPP02771 609 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 ATP5BP06576 529 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 ATXN1LP0C7T5 689 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 STK19P49842 368 aaPredicted RBP14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 CAMK4Q16566 473 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 NUGGCQ68CJ6 796 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 C19orf48Q6RUI8 117 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 MMAAQ8IVH4 418 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 TRIM59Q8IWR1 403 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 RHBDD1Q8TEB9 315 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 MRGPRX3Q96LB0 322 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 SLCO3A1Q9UIG8 710 aa14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.77□□□□□ -0.04
SMARCE1-205ENST00000431889 FAM149AA5PLN7 773 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 WNT9AO14904 365 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 PAPSS1O43252 624 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 CBFA2T3O75081 653 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 LATS1O95835 1130 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 PNMA6AP0CW24 399 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 SLC9A1P19634 815 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 METAP1P53582 386 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 NUCB2P80303 420 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 SCAPQ12770 1279 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 CETN1Q12798 172 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 PAK1Q13153 545 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 SLC14A1Q13336 389 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 CDH18Q13634 790 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 BECN1Q14457 450 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 MS4A13Q5J8X5 152 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 PITRM1Q5JRX3 1037 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 CHSY1Q86X52 802 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 SCML4Q8N228 414 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 HJURPQ8NCD3 748 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 FIBINQ8TAL6 211 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 MDM1Q8TC05 714 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 HSFY1Q96LI6 401 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 SLC6A18Q96N87 628 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 EBF2Q9HAK2 575 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 FBXL12Q9NXK8 326 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 AJAP1Q9UKB5 411 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 ANKRD6Q9Y2G4 727 aa14.77□□□□□ -0.05
SMARCE1-205ENST00000431889 H0Y626 953 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 H0Y8X5 98 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 CBX4O00257 560 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 RNASEH2AO75792 299 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 FBXO21O94952 628 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 CER1O95813 267 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 IGHV4-34P06331 123 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 PSMD8P48556 350 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 IRAK1P51617 712 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 AFF3P51826 1226 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 CLDN6P56747 220 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 ST8SIA6P61647 398 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 RING1Q06587 406 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 ZNF423Q2M1K9 1284 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 POM121L1PQ3SYA9 428 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 ZNF776Q68DI1 518 aaPredicted RBP14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 ADAT2Q7Z6V5 191 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 STK40Q8N2I9 435 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 SLC39A13Q96H72 371 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 ZDHHC5Q9C0B5 715 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 NEUROG2Q9H2A3 272 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 PLCB1Q9NQ66 1216 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 ERVW-1Q9UQF0 538 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 TLR6Q9Y2C9 796 aa14.76□□□□□ -0.05
SMARCE1-205ENST00000431889 DOCK9Q9BZ29 2069 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 BECN2A8MW95 431 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 LUC7L3O95232 432 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 TACR2P21452 398 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 MZF1P28698 734 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 GNA15P30679 374 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 ZNF445P59923 1031 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 GCNT1Q02742 428 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 C9orf64Q5T6V5 341 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 NCEH1Q6PIU2 408 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 GATAD2AQ86YP4 633 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 ZNF606Q8WXB4 792 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 SERPINB11Q96P15 392 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 ORAI3Q9BRQ5 295 aa14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 RSPH9Q9H1X1 276 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-205ENST00000431889 PABPC3Q9H361 631 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms