RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SERPINB6P35237 376 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 RFC2P35250 354 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 TPI1P60174 286 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 PITX1P78337 314 aaPredicted RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 SEMA3BQ13214 749 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 SLC1A5Q15758 541 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 C4orf50Q6ZRC1 276 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 CTAGE3PQ8IX95 158 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 TNS4Q8IZW8 715 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 ZNF75CPQ92670 426 aaPredicted RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 LGMNQ99538 433 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 EPAS1Q99814 870 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 IGSF9Q9P2J2 1179 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 TSC2P49815 1807 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 RNF103O00237 685 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 EDF1O60869 148 aaKnown RBP13.19□□□□□ -0.3
DDX56-204ENST00000431640 VAV1P15498 845 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 ERCC2P18074 760 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 CCDC15Q0P6D6 951 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 MTM1Q13496 603 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 NAB1Q13506 487 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 OVOS1Q6IE37 1185 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
DDX56-204ENST00000431640 AGGF1Q8N302 714 aaeCLIP13.19□□□□□ -0.3
DDX56-204ENST00000431640 PPM1NQ8N819 430 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 TCP10LQ8TDR4 215 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 STAMBPL1Q96FJ0 436 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 APOPT1Q96IL0 206 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 VAT1Q99536 393 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 OSBPL2Q9H1P3 480 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 TRHDEQ9UKU6 1024 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
DDX56-204ENST00000431640 RANBP2P49792 3224 aaKnown RBP13.19□□□□□ -0.3
DDX56-204ENST00000431640 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ERI2A8K979 691 aaKnown RBP13.18□□□□□ -0.3
DDX56-204ENST00000431640 F8W810 466 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 AP3B1O00203 1094 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 C1QAP02745 245 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 BDNFP23560 247 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 HTR7P34969 479 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 BRCC3P46736 316 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 WDR5P61964 334 aaKnown RBP13.18□□□□□ -0.3
DDX56-204ENST00000431640 COG7P83436 770 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 SLC20A2Q08357 652 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
DDX56-204ENST00000431640 STEAP4Q687X5 459 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ZNF449Q6P9G9 518 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 SH2D5Q6ZV89 423 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ZNF534Q76KX8 674 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 GPRIN1Q7Z2K8 1008 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 PID1Q7Z2X4 250 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
DDX56-204ENST00000431640 TRIM42Q8IWZ5 723 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ZNF398Q8TD17 642 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 CDKL2Q92772 493 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 PKMYT1Q99640 499 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 IQCGQ9H095 443 aaKnown RBP13.18□□□□□ -0.3
DDX56-204ENST00000431640 IL23AQ9NPF7 189 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 ABCC13Q9NSE7 274 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 TMEM161AQ9NX61 479 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 MOCS1Q9NZB8 636 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 KANSL3Q9P2N6 904 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 SLC12A4Q9UP95 1085 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 INPP5FQ9Y2H2 1132 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 MFHAS1Q9Y4C4 1052 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 USH1CQ9Y6N9 552 aa13.18□□□□□ -0.3
DDX56-204ENST00000431640 CFAP73A6NFT4 308 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 TRIM49D1C9J1S8 452 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 COPEO14579 308 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 PSMD3O43242 534 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 ATP5HO75947 161 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 PYGBP11216 843 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 NEK3P51956 506 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 CACNA2D1P54289 1103 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 PPIDQ08752 370 aaKnown RBP13.17□□□□□ -0.3
DDX56-204ENST00000431640 WASHC5Q12768 1159 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 SETDB1Q15047 1291 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 GALNTL6Q49A17 601 aa13.17□□□□□ -0.3
DDX56-204ENST00000431640 FYB2Q5VWT5 728 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms