RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LARS2Q15031 903 aaKnown RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 L1TD1Q5T7N2 865 aaKnown RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 LAIR1Q6GTX8 287 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 CFAP161Q6P656 301 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF804AQ7Z570 1209 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 SPRED1Q7Z699 444 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 SCN4BQ8IWT1 228 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 TCP11L2Q8N4U5 519 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZMIZ2Q8NF64 920 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 TDRD7Q8NHU6 1098 aaKnown RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 RNFT2Q96EX2 444 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 RBM17Q96I25 401 aaKnown RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 TIMP4Q99727 224 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 MACROD1Q9BQ69 325 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 HTATIP2Q9BUP3 242 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 MMRN2Q9H8L6 949 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 TXNRD2Q9NNW7 524 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 SEMA4BQ9NPR2 832 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 THAP1Q9NVV9 213 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 HDAC6Q9UBN7 1215 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 CNPY2Q9Y2B0 182 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 A0A1W2PPH5 198 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 PGPEP1LA6NFU8 196 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 SH2D7A6NKC9 451 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 FYB1O15117 783 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 RNASEH2AO75792 299 aaKnown RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF202O95125 648 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 RTN3O95197 1032 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 SGPL1O95470 568 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 EBLN1P0CF75 366 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 NDUFB7P17568 137 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 MAKP20794 623 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 EPHA8P29322 1005 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 PGM1P36871 562 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 GPD2P43304 727 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 RARRES1P49788 294 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 CCT8P50990 548 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ADPRHP54922 357 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 RNASELQ05823 741 aaKnown RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 TSTQ16762 297 aaKnown RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF766Q5HY98 468 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 PCID2Q5JVF3 399 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 WDR78Q5VTH9 848 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 GJB7Q6PEY0 223 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF474Q6S9Z5 364 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 C16orf54Q6UWD8 224 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 SYNE3Q6ZMZ3 975 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 MDGA2Q7Z553 956 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 RFX6Q8HWS3 928 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ARMC8Q8IUR7 673 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 VRK3Q8IV63 474 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 LCORLQ8N3X6 602 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ANKRD44Q8N8A2 993 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 TERB1Q8NA31 727 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ANKRD52Q8NB46 1076 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 MAFAQ8NHW3 353 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZCCHC10Q8TBK6 192 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF398Q8TD17 642 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 SH3RF3Q8TEJ3 882 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 CREB3L4Q8TEY5 395 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 APOPT1Q96IL0 206 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 CHCHD6Q9BRQ6 235 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF747Q9BV97 191 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 CIPCQ9C0C6 399 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 CLPBQ9H078 707 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 USP44Q9H0E7 712 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 TOR3AQ9H497 397 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 USP29Q9HBJ7 922 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 OLA1Q9NTK5 396 aaKnown RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 BEX4Q9NWD9 120 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 PPP1R14DQ9NXH3 145 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 AASSQ9UDR5 926 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ADAM21Q9UKJ8 722 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ARHGAP26Q9UNA1 814 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 NAALADL1Q9UQQ1 740 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 PKP3Q9Y446 797 aa3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 SIRT4Q9Y6E7 314 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P27-201ENST00000431429 ERCC6Q03468 1493 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 BTBD19C9JJ37 291 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 CLIC1O00299 241 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 QSOX1O00391 747 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 PEX12O00623 359 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SPTLC2O15270 562 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 TNFSF14O43557 240 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 GUCY1B2O75343 617 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 CNTN5O94779 1100 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 ADH4P08319 380 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 CPA1P15085 419 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 CXCR5P32302 372 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SLC8A1P32418 973 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 IDUAP35475 653 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 HNF1BP35680 557 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 GJC1P36383 396 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 MTNR1AP48039 350 aa3.47□□□□□ -1.85
HMGB1P27-201ENST00000431429 SOX10P56693 466 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms