RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 KIR2DL1P43626 348 aaPredicted RBP20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 MRPS21P82921 87 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 SPA17Q15506 151 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 ARTNQ5T4W7 220 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 CHST9Q7L1S5 443 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 CCDC117Q8IWD4 279 aaPredicted RBP20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 SFTPA1Q8IWL2 248 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 RHOT2Q8IXI1 618 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 SPEM1Q8N4L4 309 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 WFIKKN2Q8TEU8 576 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 LMLNQ96KR4 655 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 LUC7LQ9NQ29 371 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 PPARGC1AQ9UBK2 798 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 FZD10Q9ULW2 581 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 SNX10Q9Y5X0 201 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 ZNF318Q5VUA4 2279 aa20.72■□□□□ 0.91
CSNK1E-207ENST00000430335 PRRT4C9JH25 899 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 ATG13O75143 517 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 LRCH4O75427 683 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 CLDN11O75508 207 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 CDH4P55283 916 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 MTAPQ13126 283 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 CDH18Q13634 790 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 EIF4HQ15056 248 aaKnown RBP20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 TCEAL1Q15170 157 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 GEN1Q17RS7 908 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 HSF5Q4G112 596 aaPredicted RBP20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 EFHC2Q5JST6 749 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 MANEALQ5VSG8 457 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 CCAR2Q8N163 923 aaKnown RBP20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 CARNMT1Q8N4J0 409 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 WFDC5Q8TCV5 224 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 USP33Q8TEY7 942 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 RFFLQ8WZ73 363 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 OR12D3Q9UGF7 316 aa20.71■□□□□ 0.91
CSNK1E-207ENST00000430335 H0Y626 953 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 GALR2O43603 387 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 TIMM44O43615 452 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 MTA2O94776 668 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 PABPC1P11940 636 aaKnown RBP20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 MIPP30301 263 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 MRE11P49959 708 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 OXCT1P55809 520 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 RAD9BQ6WBX8 426 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 PSTKQ8IV42 348 aaKnown RBP20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 C1orf210Q8IVY1 113 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 RPLP0P6Q8NHW5 317 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 SLC35G2Q8TBE7 412 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 BTBD6Q96KE9 485 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 PRRX2Q99811 253 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 RETREG1Q9H6L5 497 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 ABCB8Q9NUT2 735 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 SPATA6Q9NWH7 488 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 KIAA1522Q9P206 1035 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 GGA2Q9UJY4 613 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 PCDHA13Q9Y5I0 950 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 KMT2EQ8IZD2 1858 aa20.7■□□□□ 0.9
CSNK1E-207ENST00000430335 PRPSAP2O60256 369 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 IPO7O95373 1038 aaKnown RBP20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 L1CAMP32004 1257 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 CD70P32970 193 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 IRAK1P51617 712 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 CCR3P51677 355 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 SEC13P55735 322 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 LMAN2Q12907 356 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 SLC12A1Q13621 1099 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 E2F5Q15329 346 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 PKN3Q6P5Z2 889 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 CIR1Q86X95 450 aaPredicted RBP20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 AHI1Q8N157 1196 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 ACDQ96AP0 544 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 PEBP4Q96S96 227 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 KCNH6Q9H252 994 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 OSGEPQ9NPF4 335 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 ELOVL2Q9NXB9 296 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 USP18Q9UMW8 372 aa20.69■□□□□ 0.9
CSNK1E-207ENST00000430335 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 FAM72CH0Y354 149 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 NPC1O15118 1278 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 SRGAP2O75044 1071 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 CNTN5O94779 1100 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 PROSCO94903 275 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 PAPSS2O95340 614 aaPredicted RBP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 HNRNPLP14866 589 aaKnown RBP eCLIP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 SEMA3BQ13214 749 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 ZNF177Q13360 481 aaPredicted RBP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 DMC1Q14565 340 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 ALFQ53S48 1182 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 C2orf27AQ580R0 203 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 FSCBQ5H9T9 825 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 ERMARDQ5T6L9 678 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 FAM72AQ5TYM5 149 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 EMC10Q5UCC4 262 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 TMEM215Q68D42 235 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 FAM72DQ6L9T8 149 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 CXorf57Q6NSI4 855 aaKnown RBP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 CYP4V2Q6ZWL3 525 aaPredicted RBP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 TRMT11Q7Z4G4 463 aaKnown RBP20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 ADIPOR2Q86V24 386 aa20.68■□□□□ 0.9
CSNK1E-207ENST00000430335 FAM72BQ86X60 149 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms