RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 UGGT2Q9NYU1 1516 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L15C9J2P7 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L13C9JLJ4 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L11C9JVI0 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L18D6R9N7 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L22D6RA61 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L17D6RBQ6 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L19D6RCP7 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L20D6RJB6 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 GHRP10912 638 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ACOT2P49753 483 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 LSM3P62310 102 aaKnown RBP16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L24Q0WX57 530 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 EPC2Q52LR7 807 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 USP17L6PQ6QN14 398 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 FAM131AQ6UXB0 335 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ERMAPQ96PL5 475 aaPredicted RBP16.78■□□□□ 0.28
RIF1-204ENST00000430328 TRNT1Q96Q11 434 aaKnown RBP16.78■□□□□ 0.28
RIF1-204ENST00000430328 SEMA6AQ9H2E6 1030 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 PRKAB2O43741 272 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 ATP4AP20648 1035 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 IPCEF1Q8WWN9 437 aaPredicted RBP16.77■□□□□ 0.28
RIF1-204ENST00000430328 CCDC86Q9H6F5 360 aaKnown RBP16.77■□□□□ 0.28
RIF1-204ENST00000430328 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 C3orf18Q9UK00 162 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 GMPPBQ9Y5P6 360 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 GH2P01242 217 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 FCER1AP12319 257 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 MAZP56270 477 aaKnown RBP16.77■□□□□ 0.28
RIF1-204ENST00000430328 FBXO36Q8NEA4 188 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 PHF21BQ96EK2 531 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 TNKS2Q9H2K2 1166 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 DBNDD1Q9H9R9 158 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 TMEM216Q9P0N5 145 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 COMMD3-BMI1R4GMX3 469 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 SEC22BO75396 215 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 ITGALP20701 1170 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 UBA1P22314 1058 aaKnown RBP16.77■□□□□ 0.28
RIF1-204ENST00000430328 MPP3Q13368 585 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 GOLGA7BQ2TAP0 167 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 GALNTL5Q7Z4T8 443 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 RSL1D1O76021 490 aaKnown RBP16.77■□□□□ 0.28
RIF1-204ENST00000430328 USP11P51784 963 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 NEK3P51956 506 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 ZNF248Q8NDW4 579 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 BORCS5Q969J3 196 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 GGA3Q9NZ52 723 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 ABCG2Q9UNQ0 655 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 KCNIP3Q9Y2W7 256 aa16.77■□□□□ 0.28
RIF1-204ENST00000430328 SERPINF2P08697 491 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 H2AFXP16104 143 aaPredicted RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 BGNP21810 368 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 ADAM17P78536 824 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 SNRNP35Q16560 246 aaKnown RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 RFX4Q33E94 735 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 SLC9A4Q6AI14 798 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 SULT1C3Q6IMI6 304 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 RSPH9Q9H1X1 276 aaPredicted RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 CCSER2Q9H7U1 834 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 A0A088AWK7 358 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 CCNT2O60583 730 aaKnown RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 GATBO75879 557 aaKnown RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 NCK1P16333 377 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 ZNF10P21506 573 aaPredicted RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 CDH4P55283 916 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 SMU1Q2TAY7 513 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.27
RIF1-204ENST00000430328 OGDHLQ9ULD0 1010 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 PCDHGA10Q9Y5H3 936 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 PCDHA10Q9Y5I2 948 aa16.77■□□□□ 0.27
RIF1-204ENST00000430328 SAGE2PA6NJ88 616 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 SRGNP10124 158 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 SPATA5L1Q9BVQ7 753 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 DNAJC11Q9NVH1 559 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 EDC4Q6P2E9 1401 aaKnown RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 CES2O00748 559 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 BBOX1O75936 387 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 NFIAQ12857 509 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 CSHL1Q14406 222 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 AADATQ8N5Z0 425 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 RAVER2Q9HCJ3 691 aaKnown RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 POLD2P49005 469 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 SMIM11AP58511 58 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 PDIA6Q15084 440 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 OAFQ86UD1 273 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 RPRD1AQ96P16 312 aaPredicted RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 WRNIP1Q96S55 665 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 VIL1P09327 827 aaKnown RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 RABL6Q3YEC7 729 aaPredicted RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 STK32AQ8WU08 396 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 FAR1Q8WVX9 515 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 ZNF354BQ96LW1 612 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 RIOK2Q9BVS4 552 aaKnown RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 VPS45Q9NRW7 570 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 FGFR1P11362 822 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms