RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 KBTBD6Q86V97 674 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 ZNF683Q8IZ20 524 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 MCOLN2Q8IZK6 566 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 AHI1Q8N157 1196 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 ZNF557Q8N988 423 aaPredicted RBP17.25■□□□□ 0.35
VRK2-204ENST00000428021 C3orf20Q8ND61 904 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 CYB5D2Q8WUJ1 264 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 HMGB4Q8WW32 186 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 RUBCNQ92622 972 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 ERLEC1Q96DZ1 483 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
VRK2-204ENST00000428021 TKTL2Q9H0I9 626 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 RAB6CQ9H0N0 254 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 TMPRSS4Q9NRS4 437 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 INVSQ9Y283 1065 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 SNX10Q9Y5X0 201 aa17.25■□□□□ 0.35
VRK2-204ENST00000428021 MUC22E2RYF6 1773 aaPredicted RBP17.25■□□□□ 0.35
VRK2-204ENST00000428021 ABCA7Q8IZY2 2146 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 TYW5A2RUC4 315 aaKnown RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 SIGLEC16A6NMB1 481 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 KRT3P12035 628 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 SKILP12757 684 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 PDGFRAP16234 1089 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 PRKCHP24723 683 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 RDXP35241 583 aaKnown RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 ATP11AP98196 1134 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 CDH18Q13634 790 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 C15orf59Q2T9L4 293 aaPredicted RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 C5orf22Q49AR2 442 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 LAIR1Q6GTX8 287 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 WDR59Q6PJI9 974 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 SND1Q7KZF4 910 aaKnown RBP eCLIP17.24■□□□□ 0.35
VRK2-204ENST00000428021 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 CENPIQ92674 756 aaPredicted RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 TTC17Q96AE7 1141 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 ZC3H10Q96K80 434 aaKnown RBP17.24■□□□□ 0.35
VRK2-204ENST00000428021 SIK2Q9H0K1 926 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 TMEM51Q9NW97 253 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 VANGL2Q9ULK5 521 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 CAPN11Q9UMQ6 739 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 CKAP5Q14008 2032 aa17.24■□□□□ 0.35
VRK2-204ENST00000428021 DDX3XO00571 662 aaKnown RBP eCLIP17.23■□□□□ 0.35
VRK2-204ENST00000428021 DLDP09622 509 aaKnown RBP17.23■□□□□ 0.35
VRK2-204ENST00000428021 NDUFV2P19404 249 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 PTPN9P43378 593 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 KLHL30Q0D2K2 578 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 USP39Q53GS9 565 aaKnown RBP17.23■□□□□ 0.35
VRK2-204ENST00000428021 PPP1R15BQ5SWA1 713 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 TTC39BQ5VTQ0 682 aaPredicted RBP17.23■□□□□ 0.35
VRK2-204ENST00000428021 HGSNATQ68CP4 663 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 FAM131BQ86XD5 332 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 DNAAF5Q86Y56 855 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 SELENOOQ9BVL4 669 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 TMEM245Q9H330 911 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 KIAA1522Q9P206 1035 aaPredicted RBP17.23■□□□□ 0.35
VRK2-204ENST00000428021 BCCIPQ9P287 314 aaKnown RBP eCLIP17.23■□□□□ 0.35
VRK2-204ENST00000428021 RAB23Q9ULC3 237 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 PLXND1Q9Y4D7 1925 aa17.23■□□□□ 0.35
VRK2-204ENST00000428021 A0A1B0GVM2 712 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 TCAF2A6NFQ2 919 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 TMCO5BA8MYB1 307 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 H0Y626 953 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 GYPCP04921 128 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 POLR2EP19388 210 aaKnown RBP17.22■□□□□ 0.35
VRK2-204ENST00000428021 BCKDHBP21953 392 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 TGM1P22735 817 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 RRM1P23921 792 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 SDC4P31431 198 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 P2RY2P41231 377 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 CSKP41240 450 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 ZBED6P86452 979 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 E2F5Q15329 346 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 MAP7D1Q3KQU3 841 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 PLK5Q496M5 336 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 RABGAP1LQ5R372 815 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
VRK2-204ENST00000428021 APCDD1Q8J025 514 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 FRMD1Q8N878 549 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 RNF214Q8ND24 703 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 RLN3Q8WXF3 142 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 SYN2Q92777 582 aaPredicted RBP17.22■□□□□ 0.35
VRK2-204ENST00000428021 MYO19Q96H55 970 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 VCPIP1Q96JH7 1222 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 C1orf74Q96LT6 269 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 RPRD1AQ96P16 312 aaPredicted RBP17.22■□□□□ 0.35
VRK2-204ENST00000428021 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 DUSP15Q9H1R2 295 aaPredicted RBP17.22■□□□□ 0.35
VRK2-204ENST00000428021 SLC6A17Q9H1V8 727 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 NCDNQ9UBB6 729 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 PLA2G4CQ9UP65 541 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 DMXL1Q9Y485 3027 aa17.22■□□□□ 0.35
VRK2-204ENST00000428021 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 DRGXA6NNA5 263 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 CNTN5O94779 1100 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 ATP5BP06576 529 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms