RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 H0Y626 953 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 GIPC1O14908 333 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 DAB1O75553 588 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 GLI1P08151 1106 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 SERPINF2P08697 491 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 GFPT1Q06210 699 aaPredicted RBP19.04■□□□□ 0.64
PSPC1-202ENST00000427943 SYCP2LQ5T4T6 812 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 TAF3Q5VWG9 929 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 OR2I1PQ8NGU4 316 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 FOXJ1Q92949 421 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 RNF34Q969K3 372 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 MYO19Q96H55 970 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 GBP4Q96PP9 640 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 PDCL3Q9H2J4 239 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 CAPN10Q9HC96 672 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 PRSS16Q9NQE7 514 aa19.04■□□□□ 0.64
PSPC1-202ENST00000427943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.04■□□□□ 0.64
PSPC1-202ENST00000427943 PLXNA2O75051 1894 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 KCNU1A8MYU2 1149 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 IGLV3-19P01714 112 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 UCHL3P15374 230 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 CYP11B1P15538 503 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 GGCXP38435 758 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 CTSOP43234 321 aaPredicted RBP19.03■□□□□ 0.64
PSPC1-202ENST00000427943 ATXN3P54252 364 aaPredicted RBP19.03■□□□□ 0.64
PSPC1-202ENST00000427943 NME3Q13232 169 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 CT47A1Q5JQC4 288 aaPredicted RBP19.03■□□□□ 0.64
PSPC1-202ENST00000427943 PITRM1Q5JRX3 1037 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 SH3PXD2AQ5TCZ1 1133 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 RABEPKQ7Z6M1 372 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 TTC17Q96AE7 1141 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 CNTNAP3BQ96NU0 1288 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 NAA15Q9BXJ9 866 aaKnown RBP19.03■□□□□ 0.64
PSPC1-202ENST00000427943 CNTNAP3Q9BZ76 1288 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 VPS16Q9H269 839 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 SLC12A6Q9UHW9 1150 aa19.03■□□□□ 0.64
PSPC1-202ENST00000427943 ASLP04424 464 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 ABCB4P21439 1286 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 OXTRP30559 389 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 CCR1P32246 355 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 KLK7P49862 253 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 BPIFB4P59827 614 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 ST8SIA6P61647 398 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 RPS14P62263 151 aaKnown RBP19.02■□□□□ 0.64
PSPC1-202ENST00000427943 SLC6A3Q01959 620 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 KRT31Q15323 416 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 PLEKHG6Q3KR16 790 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 WDR45BQ5MNZ6 344 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 DCAF12L1Q5VU92 463 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 CDKAL1Q5VV42 579 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 SMYD5Q6GMV2 418 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 RBM43Q6ZSC3 357 aaKnown RBP19.02■□□□□ 0.64
PSPC1-202ENST00000427943 SLC26A9Q7LBE3 791 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 APCDD1Q8J025 514 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 ZCCHC9Q8N567 271 aaKnown RBP19.02■□□□□ 0.64
PSPC1-202ENST00000427943 TMEM35BQ8NCS4 154 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 ENOX1Q8TC92 643 aaKnown RBP19.02■□□□□ 0.64
PSPC1-202ENST00000427943 MRGPRX3Q96LB0 322 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 PRMT1Q99873 361 aaKnown RBP19.02■□□□□ 0.64
PSPC1-202ENST00000427943 NUP58Q9BVL2 599 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 MIR1-1HGQ9H1L0 117 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 SUSD2Q9UGT4 822 aa19.02■□□□□ 0.64
PSPC1-202ENST00000427943 DOCK4Q8N1I0 1966 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 F8VZ95 297 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 DNTTP04053 509 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 TFE3P19532 575 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 ACSL1P33121 698 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 IRAK1P51617 712 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 SNX16P57768 344 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 RNASE9P60153 205 aaKnown RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 CENPCQ03188 943 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 ZNF252P-AS1Q0IIN9 211 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 OTUD1Q5VV17 481 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 NOP9Q86U38 636 aaKnown RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 DHX40Q8IX18 779 aaKnown RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 MINDY1Q8N5J2 469 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 DEFB124Q8NES8 71 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 CADM4Q8NFZ8 388 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 SNX19Q92543 992 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 ADAM33Q9BZ11 813 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 GANQ9H2C0 597 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 FBRSQ9HAH7 460 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 KIAA1522Q9P206 1035 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-202ENST00000427943 SUN2Q9UH99 717 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 ERVW-1Q9UQF0 538 aa19.01■□□□□ 0.63
PSPC1-202ENST00000427943 METTL12A8MUP2 240 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 M0QYT0 321 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 ARHGAP33O14559 1287 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 SIN3BO75182 1162 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 MOCS3O95396 460 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 MMEP08473 750 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 SLC2A3P11169 496 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 GNSP15586 552 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 PDGFRAP16234 1089 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 PMLP29590 882 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 CDH5P33151 784 aaPredicted RBP19■□□□□ 0.63
PSPC1-202ENST00000427943 NOS2P35228 1153 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 C2CD6Q53TS8 623 aa19■□□□□ 0.63
PSPC1-202ENST00000427943 RABGAP1LQ5R372 815 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms