RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 PCDHB9Q9Y5E1 797 aa13.54□□□□□ -0.24
DEPDC7-203ENST00000427755 PCDHGB2Q9Y5G2 931 aa13.54□□□□□ -0.24
DEPDC7-203ENST00000427755 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
DEPDC7-203ENST00000427755 CHD6Q8TD26 2715 aa13.54□□□□□ -0.24
DEPDC7-203ENST00000427755 C10orf142B7Z368 130 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 TAF4O00268 1085 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 BIN1O00499 593 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 PAPSS1O43252 624 aaPredicted RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 SART1O43290 800 aaKnown RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 SIN3BO75182 1162 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 DKK1O94907 266 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 GNA14O95837 355 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 IGLV3-25P01717 112 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 DNTTP04053 509 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 ACADSBP45954 432 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 GRIA4P48058 902 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 PAK1Q13153 545 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 EIF4EBP2Q13542 120 aaPredicted RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 ARID5BQ14865 1188 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 HNRNPA1L2Q32P51 320 aaKnown RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 DCAF6Q58WW2 860 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 KCNT1Q5JUK3 1230 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 LAYNQ6UX15 382 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 TMEM110Q86TL2 294 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 CFAP52Q8N1V2 620 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 KDM1BQ8NB78 822 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 STK32AQ8WU08 396 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 FAM149B1Q96BN6 582 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 DDX50Q9BQ39 737 aaKnown RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 PABPC3Q9H361 631 aaKnown RBP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 SERGEFQ9UGK8 458 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
DEPDC7-203ENST00000427755 ADAMTS9Q9P2N4 1935 aa13.52□□□□□ -0.24
DEPDC7-203ENST00000427755 E5RJQ4 531 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 FSBPO95073 299 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 MOCS2O96007 188 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 ASLP04424 464 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 IGHV4-34P06331 123 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 KRT5P13647 590 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 CD27P26842 260 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 CTSOP43234 321 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 CDH18Q13634 790 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 BECN1Q14457 450 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 C9orf64Q5T6V5 341 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 CCNI2Q6ZMN8 369 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 USP30Q70CQ3 517 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 CARNMT1Q8N4J0 409 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 ZNF606Q8WXB4 792 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 KIAA1522Q9P206 1035 aaPredicted RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 TJP2Q9UDY2 1190 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 ERVW-1Q9UQF0 538 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 APOBEC2Q9Y235 224 aaKnown RBP13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 BTBD3Q9Y2F9 522 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
DEPDC7-203ENST00000427755 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 TYW5A2RUC4 315 aaKnown RBP13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 BECN2A8MW95 431 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 TTC34A8MYJ7 566 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 FLRT2O43155 660 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 ST8SIA6P61647 398 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 SCAPQ12770 1279 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 TAF5Q15542 800 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 TEAD4Q15561 434 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 RAP1GAP2Q684P5 730 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 KIAA0895LQ68EN5 471 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 DHX40Q8IX18 779 aaKnown RBP13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 APCDD1Q8J025 514 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 LGI2Q8N0V4 545 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 FAM129BQ96TA1 746 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 NEUROG2Q9H2A3 272 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 POPDC2Q9HBU9 364 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 FBXL12Q9NXK8 326 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 SLCO3A1Q9UIG8 710 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 SCML1Q9UN30 329 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 SPEGQ15772 3267 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
DEPDC7-203ENST00000427755 A0A1W2PP55 124 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 TARSL2A2RTX5 802 aaKnown RBP13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 KCNK3O14649 394 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 CAPN9O14815 690 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 MID1O15344 667 aa13.5□□□□□ -0.25
DEPDC7-203ENST00000427755 MED7O43513 233 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms