RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 GRIA4P48058 902 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 ZBTB16Q05516 673 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CETN1Q12798 172 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CDH18Q13634 790 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 COL9A2Q14055 689 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 SUZ12Q15022 739 aaKnown RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 STILQ15468 1287 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 FSCBQ5H9T9 825 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 MS4A13Q5J8X5 152 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 C19orf48Q6RUI8 117 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CCNI2Q6ZMN8 369 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 DBX2Q6ZNG2 339 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 TAC4Q86UU9 113 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 ZNF557Q8N988 423 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 TTC17Q96AE7 1141 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 DHTKD1Q96HY7 919 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 LMLNQ96KR4 655 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 MRGPRX3Q96LB0 322 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 HSFY1Q96LI6 401 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CEP63Q96MT8 703 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 SERPINB11Q96P15 392 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 RSPH9Q9H1X1 276 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 PABPC3Q9H361 631 aaKnown RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CCDC86Q9H6F5 360 aaKnown RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 SGK2Q9HBY8 427 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 FBXL12Q9NXK8 326 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 XPO7Q9UIA9 1087 aaKnown RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 HOOK1Q9UJC3 728 aaKnown RBP10.59□□□□□ -0.71
HDLBP-213ENST00000427007 CTNND2Q9UQB3 1225 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 NCKAP1Q9Y2A7 1128 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 TLR6Q9Y2C9 796 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 PCDHGB2Q9Y5G2 931 aa10.59□□□□□ -0.71
HDLBP-213ENST00000427007 ADAMTS20P59510 1910 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 DMXL2Q8TDJ6 3036 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 TTC34A8MYJ7 566 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 CAPN9O14815 690 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 PMM2O15305 246 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 MID1O15344 667 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 RNASEH1O60930 286 aaKnown RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 LUC7L3O95232 432 aaKnown RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 C7P10643 843 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 KRT5P13647 590 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 GPD2P43304 727 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 CCT8P50990 548 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 STX17P56962 302 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 DCAF6Q58WW2 860 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 PITRM1Q5JRX3 1037 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 SYPL2Q5VXT5 272 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 RAP1GAP2Q684P5 730 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 KIAA0895LQ68EN5 471 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 TTI2Q6NXR4 508 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 DENND1BQ6P3S1 775 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 MMAAQ8IVH4 418 aaKnown RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 CCDC117Q8IWD4 279 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 LGI2Q8N0V4 545 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 EHBP1Q8NDI1 1231 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 NELFBQ8WX92 580 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 AZIN2Q96A70 460 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 SLC39A13Q96H72 371 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 KREMEN1Q96MU8 473 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 TIGD1Q96MW7 591 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 SLC6A18Q96N87 628 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 CDC6Q99741 560 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 DDX50Q9BQ39 737 aaKnown RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 ORAI3Q9BRQ5 295 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 KIAA1522Q9P206 1035 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-213ENST00000427007 ERVW-1Q9UQF0 538 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
HDLBP-213ENST00000427007 FREM2Q5SZK8 3169 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 A0A1W2PPC4 97 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 FAM149AA5PLN7 773 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 PPP1R3GB7ZBB8 358 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 E5RJQ4 531 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 BIN1O00499 593 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 P4HA2O15460 535 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 RNASEH2AO75792 299 aaKnown RBP10.57□□□□□ -0.72
HDLBP-213ENST00000427007 ASLP04424 464 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 BMP6P22004 513 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 CTSKP43235 329 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 PSMD8P48556 350 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 GALCP54803 685 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 C21orf59P57076 290 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 PITX1P78337 314 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-213ENST00000427007 GCNT1Q02742 428 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 KCNH2Q12809 1159 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 CST6Q15828 149 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 HNRNPA1L2Q32P51 320 aaKnown RBP10.57□□□□□ -0.72
HDLBP-213ENST00000427007 ZC3H12AQ5D1E8 599 aaKnown RBP10.57□□□□□ -0.72
HDLBP-213ENST00000427007 PRAMEF14Q5SWL7 426 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 C9orf64Q5T6V5 341 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 NCEH1Q6PIU2 408 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 USP30Q70CQ3 517 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
HDLBP-213ENST00000427007 CHSY1Q86X52 802 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms