RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 BIRC7Q96CA5 298 aa10.43□□□□□ -0.74
GACAT3-201ENST00000426539 IRX2Q9BZI1 471 aaPredicted RBP10.43□□□□□ -0.74
GACAT3-201ENST00000426539 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
GACAT3-201ENST00000426539 TM7SF3Q9NS93 570 aa10.43□□□□□ -0.74
GACAT3-201ENST00000426539 TOR4AQ9NXH8 423 aa10.43□□□□□ -0.74
GACAT3-201ENST00000426539 STIM2Q9P246 746 aa10.43□□□□□ -0.74
GACAT3-201ENST00000426539 CYTH4Q9UIA0 394 aa10.43□□□□□ -0.74
GACAT3-201ENST00000426539 CTNND2Q9UQB3 1225 aa10.43□□□□□ -0.74
GACAT3-201ENST00000426539 C10orf142B7Z368 130 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 BIN1O00499 593 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 SEMA4FO95754 770 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 ATP5BP06576 529 aaKnown RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 POLR2EP19388 210 aaKnown RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 CSKP41240 450 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 MATKP42679 507 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 CTSOP43234 321 aaPredicted RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 MARSP56192 900 aaKnown RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 STX17P56962 302 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 PITX1P78337 314 aaPredicted RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 NUCB2P80303 420 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 ZBTB16Q05516 673 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 KCNH2Q12809 1159 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 EIF4EBP2Q13542 120 aaPredicted RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 DCAF6Q58WW2 860 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 MS4A13Q5J8X5 152 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 MFN1Q8IWA4 741 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 CFAP52Q8N1V2 620 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 HJURPQ8NCD3 748 aaPredicted RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 SNX19Q92543 992 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 SLC4A5Q9BY07 1137 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 BTBD1Q9H0C5 482 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 INTS2Q9H0H0 1204 aaKnown RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 RSPH9Q9H1X1 276 aaPredicted RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 FBRSQ9HAH7 460 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 TM9SF3Q9HD45 589 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 OSGEPQ9NPF4 335 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 ACP6Q9NPH0 428 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 TJP2Q9UDY2 1190 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 SERGEFQ9UGK8 458 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 HOOK1Q9UJC3 728 aaKnown RBP10.42□□□□□ -0.74
GACAT3-201ENST00000426539 TLR6Q9Y2C9 796 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 BTBD3Q9Y2F9 522 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 PCDHB9Q9Y5E1 797 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 SNX11Q9Y5W9 270 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 NUMA1Q14980 2115 aa10.42□□□□□ -0.74
GACAT3-201ENST00000426539 KCNK3O14649 394 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 SIN3BO75182 1162 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 GADD45BO75293 160 aaPredicted RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 DKK1O94907 266 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 FSBPO95073 299 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 CER1O95813 267 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 IGLV3-25P01717 112 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 AFPP02771 609 aaKnown RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 DNTTP04053 509 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 IGHV4-34P06331 123 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 PPP1R2P41236 205 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 AFF3P51826 1226 aaKnown RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 CETN1Q12798 172 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 NNTQ13423 1086 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 HNRNPA1L2Q32P51 320 aaKnown RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 PITRM1Q5JRX3 1037 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 C9orf64Q5T6V5 341 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 ZNF776Q68DI1 518 aaPredicted RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 GJB7Q6PEY0 223 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 IL27RAQ6UWB1 636 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 CCNI2Q6ZMN8 369 aaPredicted RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 BEND5Q7L4P6 421 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 CARNMT1Q8N4J0 409 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 SETD7Q8WTS6 366 aaKnown RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 STK32AQ8WU08 396 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 GOLGA1Q92805 767 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 FAM149B1Q96BN6 582 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 SERPINB11Q96P15 392 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 MED15Q96RN5 788 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 SRRTQ9BXP5 876 aaKnown RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 PABPC3Q9H361 631 aaKnown RBP10.41□□□□□ -0.74
GACAT3-201ENST00000426539 EBF2Q9HAK2 575 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 ST7Q9NRC1 585 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 SUN2Q9UH99 717 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 ANKRD6Q9Y2G4 727 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 PCDHGB2Q9Y5G2 931 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 CHD6Q8TD26 2715 aa10.41□□□□□ -0.74
GACAT3-201ENST00000426539 AKAP13Q12802 2813 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ASPMQ8IZT6 3477 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 BICDL2A1A5D9 508 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 BECN2A8MW95 431 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 TTC34A8MYJ7 566 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 E5RJQ4 531 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 H0Y8X5 98 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 MOCS2O96007 188 aaPredicted RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ASLP04424 464 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ATXN1LP0C7T5 689 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 KRT5P13647 590 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 CD27P26842 260 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 RDXP35241 583 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ACADSBP45954 432 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 GRIA4P48058 902 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 APBA1Q02410 837 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms