RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PIK3R6Q5UE93 754 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3GQ6DHY5 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3CQ6IPX1 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 UNC45BQ8IWX7 931 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3Q8IZP1 549 aaPredicted RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 SIX6OS1Q8N1H7 587 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 OXR1Q8N573 874 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 WFDC5Q8TCV5 224 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 INTS4Q96HW7 963 aaKnown RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 LGMNQ99538 433 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TMEM8AQ9HCN3 771 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 HESX1Q9UBX0 185 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 FZD4Q9ULV1 537 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 NUMA1Q14980 2115 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 FLNBO75369 2602 aaKnown RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 A0A1W2PR77 199 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 TYW5A2RUC4 315 aaKnown RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 YJEFN3A6XGL0 299 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 E7ENQ6 273 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 TULP2O00295 520 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 WNT9AO14904 365 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 IRAK2O43187 625 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 ASLP04424 464 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 NR2F2P24468 414 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 CSKP41240 450 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 NXPH1P58417 271 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 TLE3Q04726 772 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 ADIGQ0VDE8 80 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 KCNJ12Q14500 433 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 FOXD4L5Q5VV16 416 aaPredicted RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 BROXQ5VW32 411 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 KRT39Q6A163 491 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 SPACA3Q8IXA5 215 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 CARNMT1Q8N4J0 409 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 FIBINQ8TAL6 211 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 FOXD4L4Q8WXT5 416 aaPredicted RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 TTC17Q96AE7 1141 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 NAF1Q96HR8 494 aaKnown RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 IRX2Q9BZI1 471 aaPredicted RBP15.22■□□□□ 0.03
PDAP1-202ENST00000426447 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 PCDHA7Q9UN72 937 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 TRAF3IP3Q9Y228 551 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 CEP83Q9Y592 693 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 BPTFQ12830 3046 aa15.22■□□□□ 0.03
PDAP1-202ENST00000426447 HELZ2Q9BYK8 2649 aaKnown RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 TARSL2A2RTX5 802 aaKnown RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 ERVH48-1M5A8F1 160 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 LCP1P13796 627 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 GOT1P17174 413 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 PSMC2P35998 433 aaKnown RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 RXRGP48443 463 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 PSMD8P48556 350 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 E2F1Q01094 437 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D25Q3MII6 688 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 RNF219Q5W0B1 726 aaPredicted RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 RESP18Q5W5W9 173 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 NUGGCQ68CJ6 796 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 CACTIN-AS1Q8N1I8 211 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 UBA3Q8TBC4 463 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 TATDN2Q93075 761 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 MYO19Q96H55 970 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 FAXDC2Q96IV6 333 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 DDX50Q9BQ39 737 aaKnown RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 ERVMER34-1Q9H9K5 563 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.03
PDAP1-202ENST00000426447 ERVW-1Q9UQF0 538 aa15.21■□□□□ 0.03
PDAP1-202ENST00000426447 COL5A1P20908 1838 aaPredicted RBP15.2■□□□□ 0.02
PDAP1-202ENST00000426447 EDDM13A0A1B0GTR0 161 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 TTC34A8MYJ7 566 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 ACSL4O60488 711 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 MAGEC1O60732 1142 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 MOCS3O95396 460 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 CD19P15391 556 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 SLC6A4P31645 630 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 INSM1Q01101 510 aaPredicted RBP15.2■□□□□ 0.02
PDAP1-202ENST00000426447 BST2Q10589 180 aaKnown RBP15.2■□□□□ 0.02
PDAP1-202ENST00000426447 ADAM9Q13443 819 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 CDH18Q13634 790 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 STAT4Q14765 748 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 HS1BP3Q53T59 392 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 SGO2Q562F6 1265 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.2■□□□□ 0.02
PDAP1-202ENST00000426447 PRPF39Q86UA1 669 aaKnown RBP15.2■□□□□ 0.02
PDAP1-202ENST00000426447 MFSD2AQ8NA29 543 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 KDM1BQ8NB78 822 aa15.2■□□□□ 0.02
PDAP1-202ENST00000426447 HJURPQ8NCD3 748 aaPredicted RBP15.2■□□□□ 0.02
PDAP1-202ENST00000426447 ZNF248Q8NDW4 579 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms