RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LSM14AQ8ND56 463 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 OR14C36Q8NHC7 312 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TATDN2Q93075 761 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RNF34Q969K3 372 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TTC17Q96AE7 1141 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 HSFY1Q96LI6 401 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NRSN2Q9GZP1 204 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SCAND2PQ9GZW5 306 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NEUROG2Q9H2A3 272 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 METTL14Q9HCE5 456 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TOR4AQ9NXH8 423 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 BTBD3Q9Y2F9 522 aa12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FARP1Q9Y4F1 1045 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GON4LQ3T8J9 2241 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 YJEFN3A6XGL0 299 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 E7ENQ6 273 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PLK4O00444 970 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 LTFP02788 710 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ZNF18P17022 549 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ACTN2P35609 894 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ACADSBP45954 432 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DAOAP59103 153 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ECT2LQ008S8 904 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 E2F1Q01094 437 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 IL9RQ01113 521 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SEMG2Q02383 582 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 OVGP1Q12889 678 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MTA1Q13330 715 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CNGA2Q16280 664 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PTPRNQ16849 979 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NCEH1Q6PIU2 408 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MMAAQ8IVH4 418 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DHX40Q8IX18 779 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SERAC1Q96JX3 654 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NT5C1BQ96P26 610 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ERVMER34-1Q9H9K5 563 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ARMCX3Q9UH62 379 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MYOFQ9NZM1 2061 aa12.72□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PI4KAP42356 2102 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CEP295Q9C0D2 2601 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 A0A1W2PP55 124 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TLR4O00206 839 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SIN3BO75182 1162 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SMC2O95347 1197 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 IL1BP01584 269 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 C7P10643 843 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CD70P32970 193 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CSKP41240 450 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DPYDQ12882 1025 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CAMK2BQ13554 666 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ARID5BQ14865 1188 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 BROXQ5VW32 411 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MSANTD2Q6P1R3 559 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RFWD3Q6PCD5 774 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TMEM270Q6UE05 265 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KRBA2Q6ZNG9 492 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GATAD2AQ86YP4 633 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ATP6V0D2Q8N8Y2 350 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MFSD2AQ8NA29 543 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PIP4K2CQ8TBX8 421 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FAM149B1Q96BN6 582 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ADAMTS1Q9UHI8 967 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DMTF1Q9Y222 760 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TLR6Q9Y2C9 796 aa12.71□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TNRC6BQ9UPQ9 1833 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MYO18AQ92614 2054 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 C1QTNF3-AMACRE9PGA6 284 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MID1O15344 667 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MSI1O43347 362 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MED7O43513 233 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF202O95125 648 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC2A3P11169 496 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CKMT2P17540 419 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PPP1R2P41236 205 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NDUFA8P51970 172 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SNX16P57768 344 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LRMPQ12912 555 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TARDBPQ13148 414 aaKnown RBP eCLIP12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NNTQ13423 1086 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 IQCHQ86VS3 1027 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CACTIN-AS1Q8N1I8 211 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC35F5Q8WV83 523 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FGF11Q92914 225 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC6A18Q96N87 628 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MED15Q96RN5 788 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MIS12Q9H081 205 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms