RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PITX1P78337 314 aaPredicted RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 NME3Q13232 169 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 ZBTB6Q15916 424 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 ARHGAP17Q68EM7 881 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 CTU1Q7Z7A3 348 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 DEFB106AQ8N104 65 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 SLC43A3Q8NBI5 491 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 PPP1R14CQ8TAE6 165 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 MCUR1Q96AQ8 359 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 OXNAD1Q96HP4 312 aaPredicted RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 NSL1Q96IY1 281 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 CADM1Q9BY67 442 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 NMUR2Q9GZQ4 415 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 FAM124BQ9H5Z6 455 aaPredicted RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 XAB2Q9HCS7 855 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 CHST12Q9NRB3 414 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 PPARGC1AQ9UBK2 798 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 ZNF180Q9UJW8 692 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 DERAQ9Y315 318 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 CLDN5O00501 218 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 MFSD11O43934 449 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 THP07101 528 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 ESRRAP11474 423 aaPredicted RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 TKTP29401 623 aaKnown RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 MAGEA6P43360 314 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 CLCNKBP51801 687 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 RABGGTBP53611 331 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 RCN2Q14257 317 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 TRIM68Q6AZZ1 485 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 GSTCDQ8NEC7 633 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 APPL2Q8NEU8 664 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 DBF4BQ8NFT6 615 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 SKA1Q96BD8 255 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 LRRC39Q96DD0 335 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.97□□□□□ -0.655e-24■■■■■ 156.6
CUX1-205ENST00000425244 IL1RAPL1Q9NZN1 696 aa10.97□□□□□ -0.65
CUX1-205ENST00000425244 TIMM13Q9Y5L4 95 aaPredicted RBP10.97□□□□□ -0.65
CUX1-205ENST00000425244 A0A0U1RQF3 1178 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 E2F8A0AVK6 867 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 HMX2A2RU54 273 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 TRAFD1O14545 582 aaPredicted RBP10.96□□□□□ -0.65
CUX1-205ENST00000425244 TGDSO95455 350 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
CUX1-205ENST00000425244 HSPA8P11142 646 aaKnown RBP10.96□□□□□ -0.65
CUX1-205ENST00000425244 CALB2P22676 271 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 NR2C2P49116 596 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 CDK7P50613 346 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 TLE2Q04725 743 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 TAF11Q15544 211 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 CES4AQ5XG92 561 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 ATG16L1Q676U5 607 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 C16orf46Q6P387 395 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 RTN4RL1Q86UN2 441 aaPredicted RBP10.96□□□□□ -0.65
CUX1-205ENST00000425244 PIGZQ86VD9 579 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 BTBD10Q9BSF8 475 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 LNPEPQ9UIQ6 1025 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.65
CUX1-205ENST00000425244 A0A0A0MRY4 1105 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 FAM159BA6NKW6 160 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 RNF103O00237 685 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 XPOTO43592 962 aaKnown RBP10.96□□□□□ -0.66
CUX1-205ENST00000425244 HUS1O60921 280 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 NBNO60934 754 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 CD4P01730 458 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 SELPP16109 830 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 TPSB2P20231 275 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 MGAT1P26572 445 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 CYP2C18P33260 490 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 MAGEA3P43357 314 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 AQP5P55064 265 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 TPSAB1Q15661 275 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 CES3Q6UWW8 571 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 DSTYKQ6XUX3 929 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 RINLQ6ZS11 566 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 ADGRF2Q8IZF7 708 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 COLGALT1Q8NBJ5 622 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 CENPIQ92674 756 aaPredicted RBP10.96□□□□□ -0.66
CUX1-205ENST00000425244 PTCD3Q96EY7 689 aaKnown RBP10.96□□□□□ -0.66
CUX1-205ENST00000425244 PAWRQ96IZ0 340 aaKnown RBP10.96□□□□□ -0.66
CUX1-205ENST00000425244 ZNF333Q96JL9 665 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 SPATA13Q96N96 652 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 C11orf84Q9BUA3 381 aaPredicted RBP10.96□□□□□ -0.66
CUX1-205ENST00000425244 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.66
CUX1-205ENST00000425244 HIPK3Q9H422 1215 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 ARHGEF4Q9NR80 690 aa10.96□□□□□ -0.66
CUX1-205ENST00000425244 HNRNPCL1O60812 293 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 ENO1P06733 434 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
CUX1-205ENST00000425244 KCNE1P15382 129 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 NDUFV1P49821 464 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 TAF6P49848 677 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 BFSP2Q13515 415 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 SEMA5AQ13591 1074 aa10.95□□□□□ -0.66
CUX1-205ENST00000425244 SPDYAQ5MJ70 313 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms