RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 FBXL22Q6P050 247 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 DNAJC24Q6P3W2 148 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 SERPINA13PQ6UXR4 307 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 ADIPOR2Q86V24 386 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 VCPIP1Q96JH7 1222 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 SPACA7Q96KW9 195 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 PPP1R9BQ96SB3 815 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 ADAM33Q9BZ11 813 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 XPO4Q9C0E2 1151 aaKnown RBP19.3■□□□□ 0.68
PRNP-202ENST00000424424 VANGL2Q9ULK5 521 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRNP-202ENST00000424424 RAD54BQ9Y620 910 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 BZW2Q9Y6E2 419 aaKnown RBP19.3■□□□□ 0.68
PRNP-202ENST00000424424 RALGAPA1Q6GYQ0 2036 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 CFAP54Q96N23 3096 aa19.3■□□□□ 0.68
PRNP-202ENST00000424424 C2CD4BA6NLJ0 364 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 SIGLEC16A6NMB1 481 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 ENDOD1O94919 500 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 ASLP04424 464 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 DLDP09622 509 aaKnown RBP19.29■□□□□ 0.68
PRNP-202ENST00000424424 DESP17661 470 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 GABRG2P18507 467 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 PTPN9P43378 593 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 ZBED6P86452 979 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 SLC12A1Q13621 1099 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 ENPP2Q13822 863 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 ELF2Q15723 593 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 CDO1Q16878 200 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 ARL13BQ3SXY8 428 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 FNDC3BQ53EP0 1204 aaKnown RBP19.29■□□□□ 0.68
PRNP-202ENST00000424424 TDRD12Q587J7 1177 aaKnown RBP19.29■□□□□ 0.68
PRNP-202ENST00000424424 LRRC31Q6UY01 552 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 STRADAQ7RTN6 431 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 MCOLN2Q8IZK6 566 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 CCAR2Q8N163 923 aaKnown RBP19.29■□□□□ 0.68
PRNP-202ENST00000424424 JOSD2Q8TAC2 188 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 CPLX3Q8WVH0 158 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 SORCS1Q8WY21 1168 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 SYN2Q92777 582 aaPredicted RBP19.29■□□□□ 0.68
PRNP-202ENST00000424424 C1orf74Q96LT6 269 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 SYT11Q9BT88 431 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 CAPN11Q9UMQ6 739 aa19.29■□□□□ 0.68
PRNP-202ENST00000424424 LUC7L2Q9Y383 392 aaKnown RBP19.29■□□□□ 0.68
PRNP-202ENST00000424424 ITIH6Q6UXX5 1313 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 PLXND1Q9Y4D7 1925 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 TMCO5BA8MYB1 307 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 RHOBTB1O94844 696 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 EPHX1P07099 455 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 RETP07949 1114 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 GZMAP12544 262 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 GPD1P21695 349 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 RFC1P35251 1148 aaPredicted RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 ATXN1P54253 815 aaKnown RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 ST8SIA6P61647 398 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 ZNF177Q13360 481 aaPredicted RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 FUT11Q495W5 492 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 CCDC14Q49A88 953 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 FSCBQ5H9T9 825 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 KIAA1211LQ6NV74 962 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 BNIPLQ7Z465 357 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 KBTBD6Q86V97 674 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 VPS36Q86VN1 386 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 FAM131BQ86XD5 332 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 FAM160A2Q8N612 972 aaPredicted RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 GPR161Q8N6U8 529 aaKnown RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 RNF214Q8ND24 703 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 OLIG1Q8TAK6 271 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 CYB5D2Q8WUJ1 264 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 ZC3H10Q96K80 434 aaKnown RBP19.28■□□□□ 0.68
PRNP-202ENST00000424424 HAPLN3Q96S86 360 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 INVSQ9Y283 1065 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 THADAQ6YHU6 1953 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 DMDP11532 3685 aa19.28■□□□□ 0.68
PRNP-202ENST00000424424 CKAP5Q14008 2032 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 VPS13AQ96RL7 3174 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 ZNF217O75362 1048 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 CLDN11O75508 207 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 GJB6O95452 261 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 SKILP12757 684 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 C15orf59Q2T9L4 293 aaPredicted RBP19.27■□□□□ 0.68
PRNP-202ENST00000424424 C5orf22Q49AR2 442 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 PITRM1Q5JRX3 1037 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 E4F1Q66K89 784 aaPredicted RBP19.27■□□□□ 0.68
PRNP-202ENST00000424424 DCUN1D2Q6PH85 259 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 WDR59Q6PJI9 974 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 IGSF8Q969P0 613 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 TTC17Q96AE7 1141 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 LOXL4Q96JB6 756 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 LMLNQ96KR4 655 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 SUN2Q9UH99 717 aa19.27■□□□□ 0.68
PRNP-202ENST00000424424 DCLK1O15075 740 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 MAP3K13O43283 966 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 RTN2O75298 545 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 NDUFV2P19404 249 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 RRM1P23921 792 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 GGCXP38435 758 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 P2RY2P41231 377 aa19.26■□□□□ 0.67
PRNP-202ENST00000424424 CSKP41240 450 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms