RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	TFB1M	Q8WVM0	346 aa	Known RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	SUSD6	Q92537	303 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	MAML1	Q92585	1016 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	SGSM3	Q96HU1	749 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	PWWP2A	Q96N64	755 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	KCTD15	Q96SI1	283 aa	Predicted RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	NSRP1	Q9H0G5	558 aa	Known RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	RAB6C	Q9H0N0	254 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	ACSS3	Q9H6R3	686 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	PPAN	Q9NQ55	473 aa	Known RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	DNAJC17	Q9NVM6	304 aa	Known RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	GPATCH2L	Q9NWQ4	482 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	NKIRAS1	Q9NYS0	192 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	PCDHB8	Q9UN66	801 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	SMG5	Q9UPR3	1016 aa	Known RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	HEY1	Q9Y5J3	304 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	USP3	Q9Y6I4	520 aa		10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	PDCD11	Q14690	1871 aa	Known RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.35	□□□□□ -0.75
POLR1A-204	ENST00000424089	SCN1A	P35498	2009 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	MED19	A0JLT2	244 aa	Predicted RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	HHLA1	C9JL84	531 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CLDN5	O00501	218 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	PPP1R12A	O14974	1030 aa	Predicted RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	PER2	O15055	1255 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	MTSS1	O43312	755 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	BEST1	O76090	585 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	POMC	P01189	267 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	MLN	P12872	115 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	BRAF	P15056	766 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	TFE3	P19532	575 aa	Predicted RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	IBSP	P21815	317 aa	Predicted RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	RBL1	P28749	1068 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	HTR7	P34969	479 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	NBL1	P41271	181 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	GLUD2	P49448	558 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	DUSP6	Q16828	381 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	ANKRD22	Q5VYY1	191 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	HEATR6	Q6AI08	1181 aa	Known RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	OVOS1	Q6IE37	1185 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	C3orf62	Q6ZUJ4	267 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CYS1	Q717R9	158 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	DGLUCY	Q7Z3D6	616 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CPLX4	Q7Z7G2	160 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CCDC13	Q8IYE1	715 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CCDC185	Q8N715	623 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	RNF139	Q8WU17	664 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	LINC01599	Q8WXQ3	324 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	ALKBH8	Q96BT7	664 aa	Known RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	OLFM3	Q96PB7	478 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CYTH2	Q99418	400 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	PKMYT1	Q99640	499 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	ULBP1	Q9BZM6	244 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	ELAC1	Q9H777	363 aa	Known RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	XAB2	Q9HCS7	855 aa	Known RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	RAB6B	Q9NRW1	208 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	ETNK2	Q9NVF9	386 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	FBXW11	Q9UKB1	542 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	PCDHB7	Q9Y5E2	793 aa		10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.34	□□□□□ -0.75
POLR1A-204	ENST00000424089	CLUH	O75153	1309 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	TMEM120B	A0PK00	339 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	RASA4B	C9J798	803 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	PRPF4	O43172	522 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	RASA4	O43374	803 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	OPHN1	O60890	802 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	FGF18	O76093	207 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	TMEM63A	O94886	807 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	FYN	P06241	537 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	HOXB8	P17481	243 aa	Predicted RBP	10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	MX2	P20592	715 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	GBP2	P32456	591 aa	Predicted RBP	10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	STX2	P32856	288 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	CXCR3	P49682	368 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	AFF1	P51825	1210 aa	Known RBP	10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	SEC24C	P53992	1094 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	GPX6	P59796	221 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	ZNF33A	Q06730	810 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	DSC1	Q08554	894 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	SEMA5A	Q13591	1074 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	BBS9	Q3SYG4	887 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	FNBP1L	Q5T0N5	605 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	UBAP2	Q5T6F2	1119 aa	Known RBP	10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	NCBP2-AS2	Q69YL0	99 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	CES5A	Q6NT32	575 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	ANKRD54	Q6NXT1	300 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	ADGRD1	Q6QNK2	874 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	KCNT2	Q6UVM3	1135 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	VSTM1	Q6UX27	236 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	CD300LG	Q6UXG3	332 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	TRABD2A	Q86V40	505 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	FAM131B	Q86XD5	332 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	CCNJL	Q8IV13	435 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	DCP1B	Q8IZD4	617 aa	Known RBP	10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	RNF169	Q8NCN4	708 aa		10.33	□□□□□ -0.76
POLR1A-204	ENST00000424089	KREMEN2	Q8NCW0	462 aa		10.33	□□□□□ -0.76

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