RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 NDUFV1P49821 464 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 CACNA2D1P54289 1103 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 USP4Q13107 963 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 NME3Q13232 169 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 HIC1Q14526 733 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 KYAT1Q16773 422 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 NT5DC4Q86YG4 428 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 SULF1Q8IWU6 871 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 HACE1Q8IYU2 909 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 OR52K1Q8NGK4 314 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 ATP2A3Q93084 1043 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 SETD4Q9NVD3 440 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 TRIP12Q14669 1992 aaPredicted RBP16.22■□□□□ 0.19
CDH1-202ENST00000422392 SBF1O95248 1867 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 RALGAPA2Q2PPJ7 1873 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 BEST1O76090 585 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 RECQL4O94761 1208 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 CD1EP15812 388 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 PGAM1P18669 254 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 FDFT1P37268 417 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 IREB2P48200 963 aaKnown RBP16.21■□□□□ 0.19
CDH1-202ENST00000422392 PGGT1BP53609 377 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 AP2B1P63010 937 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 DLG2Q15700 870 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 OTUD1Q5VV17 481 aaPredicted RBP16.21■□□□□ 0.19
CDH1-202ENST00000422392 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 RNF111Q6ZNA4 994 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 CATSPER4Q7RTX7 472 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 ERO1BQ86YB8 467 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 PHTF2Q8N3S3 785 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 RNF139Q8WU17 664 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 GATA6Q92908 595 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 AGAP2Q99490 1192 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 OSMRQ99650 979 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 C1orf21Q9H246 121 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 VCXQ9H320 206 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 CAB39LQ9H9S4 337 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 COPG2Q9UBF2 871 aa16.21■□□□□ 0.19
CDH1-202ENST00000422392 SERPINE1P05121 402 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 CDK18Q07002 472 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 ZRSR2Q15696 482 aaKnown RBP16.21■□□□□ 0.18
CDH1-202ENST00000422392 PID1Q7Z2X4 250 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 PIGZQ86VD9 579 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 CCNJLQ8IV13 435 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 ADAM32Q8TC27 787 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 TSC22D3Q99576 134 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 TXNDC16Q9P2K2 825 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 DCDC2Q9UHG0 476 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.18
CDH1-202ENST00000422392 FAM72CH0Y354 149 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 RALBP11234 206 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 ACAT1P24752 427 aaKnown RBP16.2■□□□□ 0.18
CDH1-202ENST00000422392 MATKP42679 507 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 DSG1Q02413 1049 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 TBCCQ15814 346 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 FBXO47Q5MNV8 452 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 FAM72AQ5TYM5 149 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 SYPL2Q5VXT5 272 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 PDPK2PQ6A1A2 396 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 FAM72DQ6L9T8 149 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 CYS1Q717R9 158 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 FAM72BQ86X60 149 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 DCLK2Q8N568 766 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 BEST2Q8NFU1 509 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 PPTC7Q8NI37 304 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 PPP4R1Q8TF05 950 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 DCPSQ96C86 337 aaKnown RBP16.2■□□□□ 0.18
CDH1-202ENST00000422392 SNX15Q9NRS6 342 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 PACSIN3Q9UKS6 424 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 ASB14A6NK59 587 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 ZNF195O14628 629 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 AMHP03971 560 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 MLNP12872 115 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 IGFBP6P24592 240 aaPredicted RBP16.2■□□□□ 0.18
CDH1-202ENST00000422392 COPAP53621 1224 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 SNX16P57768 344 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 IRF9Q00978 393 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 CDC16Q13042 620 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 TCHHL1Q5QJ38 904 aaPredicted RBP16.2■□□□□ 0.18
CDH1-202ENST00000422392 UNC93AQ86WB7 457 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDH1-202ENST00000422392 ACMSDQ8TDX5 336 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 CERS2Q96G23 380 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 PPP1R36Q96LQ0 422 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 ECSITQ9BQ95 431 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 ASB3Q9Y575 518 aa16.2■□□□□ 0.18
CDH1-202ENST00000422392 PDCD11Q14690 1871 aaKnown RBP16.19■□□□□ 0.18
CDH1-202ENST00000422392 CCDC78A2IDD5 438 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 KPNA7A9QM74 516 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 GOLGA8TH3BQL2 631 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 M0QYT0 321 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 DCXO43602 365 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 GNAT1P11488 350 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 LPCAT4Q643R3 524 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 SLC27A1Q6PCB7 646 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 NAPRTQ6XQN6 538 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 HFE2Q6ZVN8 426 aa16.19■□□□□ 0.18
CDH1-202ENST00000422392 STRADAQ7RTN6 431 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms