RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 E4F1Q66K89 784 aaPredicted RBP27.28■■□□□ 1.96
CDK9-202ENST00000421939 FBXL22Q6P050 247 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 SERPINA13PQ6UXR4 307 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 BNIPLQ7Z465 357 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 CYB5D2Q8WUJ1 264 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 ZC3H10Q96K80 434 aaKnown RBP27.28■■□□□ 1.96
CDK9-202ENST00000421939 AIPL1Q9NZN9 384 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 A0A1B0GVM2 712 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 TCAF2A6NFQ2 919 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 H0Y626 953 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 ATP5BP06576 529 aaKnown RBP27.27■■□□□ 1.96
CDK9-202ENST00000421939 POLR2EP19388 210 aaKnown RBP27.27■■□□□ 1.96
CDK9-202ENST00000421939 P2RY2P41231 377 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 ATXN1P54253 815 aaKnown RBP27.27■■□□□ 1.96
CDK9-202ENST00000421939 NFKBIBQ15653 356 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 ELF2Q15723 593 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 FNDC3BQ53EP0 1204 aaKnown RBP27.27■■□□□ 1.96
CDK9-202ENST00000421939 FSCBQ5H9T9 825 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 CIR1Q86X95 450 aaPredicted RBP27.27■■□□□ 1.96
CDK9-202ENST00000421939 C3orf20Q8ND61 904 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 SPACA7Q96KW9 195 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 RPRD1AQ96P16 312 aaPredicted RBP27.27■■□□□ 1.96
CDK9-202ENST00000421939 NUP58Q9BVL2 599 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 TSPY26PQ9H489 355 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 ANLNQ9NQW6 1124 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 IFNKQ9P0W0 207 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 VANGL2Q9ULK5 521 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 PLA2G4CQ9UP65 541 aa27.27■■□□□ 1.96
CDK9-202ENST00000421939 I6L893 689 aaPredicted RBP27.26■■□□□ 1.95
CDK9-202ENST00000421939 SYNCRIPO60506 623 aaKnown RBP27.26■■□□□ 1.95
CDK9-202ENST00000421939 GJB6O95452 261 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 DLDP09622 509 aaKnown RBP27.26■■□□□ 1.95
CDK9-202ENST00000421939 TNFAIP3P21580 790 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 SDC4P31431 198 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 PRKCIP41743 596 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 ATP11AP98196 1134 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 CCAR2Q8N163 923 aaKnown RBP27.26■■□□□ 1.95
CDK9-202ENST00000421939 JOSD2Q8TAC2 188 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 RXFP2Q8WXD0 754 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 RLN3Q8WXF3 142 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 LOXL4Q96JB6 756 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 SELENOOQ9BVL4 669 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 SIK2Q9H0K1 926 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 KIAA1522Q9P206 1035 aaPredicted RBP27.26■■□□□ 1.95
CDK9-202ENST00000421939 INTS6Q9UL03 887 aaKnown RBP27.26■■□□□ 1.95
CDK9-202ENST00000421939 CKAP5Q14008 2032 aa27.26■■□□□ 1.95
CDK9-202ENST00000421939 C2CD4BA6NLJ0 364 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 KRT3P12035 628 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 PDGFRAP16234 1089 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 BCKDHBP21953 392 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 CSKP41240 450 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 BYSLQ13895 437 aaKnown RBP27.25■■□□□ 1.95
CDK9-202ENST00000421939 PTPRNQ16849 979 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 MAP7D1Q3KQU3 841 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 ACAD10Q6JQN1 1059 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 PPP1R2P3Q6NXS1 205 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 LRSAM1Q6UWE0 723 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 FAM131BQ86XD5 332 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 IGSF8Q969P0 613 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 TTC17Q96AE7 1141 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 DUSP15Q9H1R2 295 aaPredicted RBP27.25■■□□□ 1.95
CDK9-202ENST00000421939 HAUS4Q9H6D7 363 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 SDK1Q7Z5N4 2213 aa27.25■■□□□ 1.95
CDK9-202ENST00000421939 PLXND1Q9Y4D7 1925 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 A0A1W2PQJ5 194 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 RHOBTB1O94844 696 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 EPN2O95208 641 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 EPHX1P07099 455 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 KLHL30Q0D2K2 578 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 CDO1Q16878 200 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 PITRM1Q5JRX3 1037 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 DNAJC24Q6P3W2 148 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 C14orf80Q86SX3 495 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 KIAA2013Q8IYS2 634 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 MRGPRX1Q96LB2 322 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 TMEM245Q9H330 911 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 TAS2R14Q9NYV8 317 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 DMXL1Q9Y485 3027 aa27.24■■□□□ 1.95
CDK9-202ENST00000421939 LRP3O75074 770 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 ENDOD1O94919 500 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 MOCS3O95396 460 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 ASLP04424 464 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 HLA-EP13747 358 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 PTPN9P43378 593 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 IRAK1P51617 712 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 C15orf59Q2T9L4 293 aaPredicted RBP27.23■■□□□ 1.95
CDK9-202ENST00000421939 CCDC14Q49A88 953 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 ACBD5Q5T8D3 534 aaPredicted RBP27.23■■□□□ 1.95
CDK9-202ENST00000421939 PMS2CLQ68D20 193 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 KIAA1324Q6UXG2 1013 aaKnown RBP27.23■■□□□ 1.95
CDK9-202ENST00000421939 ZNF571Q7Z3V5 609 aaPredicted RBP27.23■■□□□ 1.95
CDK9-202ENST00000421939 MCOLN2Q8IZK6 566 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 GPR161Q8N6U8 529 aaKnown RBP27.23■■□□□ 1.95
CDK9-202ENST00000421939 IQCDQ96DY2 449 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 SLC6A17Q9H1V8 727 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 PARD6AQ9NPB6 346 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 TMPRSS4Q9NRS4 437 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 SNX10Q9Y5X0 201 aa27.23■■□□□ 1.95
CDK9-202ENST00000421939 TCRBV5S1A1TA0A578 114 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 SIGLEC16A6NMB1 481 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms