RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SYAP1Q96A49 352 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 EDC3Q96F86 508 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 TMEM41AQ96HV5 264 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 LYZL4Q96KX0 146 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 STK33Q9BYT3 514 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 ASIC5Q9NY37 505 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 TERF2IPQ9NYB0 399 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 RSPH14Q9UHP6 348 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 SLC39A10Q9ULF5 831 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 NFU1Q9UMS0 254 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 MAGED2Q9UNF1 606 aaPredicted RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 HECW1Q76N89 1606 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 SPATA31E1Q6ZUB1 1445 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 KIF27Q86VH2 1401 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 MTUS2Q5JR59 1369 aa3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CFAP65Q6ZU64 1925 aaKnown RBP3.76□□□□□ -1.81
SDCBPP3-201ENST00000419629 CFAP43Q8NDM7 1665 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 PTPN23Q9H3S7 1636 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM90A8PA6NJQ4 464 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 FYB1O15117 783 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 CA12O43570 354 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 PLA2G6O60733 806 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 MBD3O95983 291 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 CRYABP02511 175 aaKnown RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ALPLP05186 524 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM90A13PP0C7W8 464 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM90A24PP0C7X0 464 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 SETSIPP0DME0 302 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 T-ENOLP0DO92 83 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 TGFB3P10600 412 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 PECAM1P16284 738 aaPredicted RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ABCB4P21439 1286 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 HOXD9P28356 352 aaPredicted RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 DUSP1P28562 367 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 TACR3P29371 465 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 PBX1P40424 430 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 HTR6P50406 440 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 TPM4P67936 248 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 NUCB2P80303 420 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 DEUP1Q05D60 604 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 RAB30Q15771 203 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 CNGA3Q16281 694 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZSCAN23Q3MJ62 389 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 GLE1Q53GS7 698 aaKnown RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 TMEM196Q5HYL7 178 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 SYCP2LQ5T4T6 812 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 PGBD2Q6P3X8 592 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 TMED8Q6PL24 325 aaPredicted RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 KRT27Q7Z3Y8 459 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 GATAD2AQ86YP4 633 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZNF397Q8NF99 534 aaPredicted RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZNF398Q8TD17 642 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 WDR60Q8WVS4 1066 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 KIAA1191Q96A73 305 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM210AQ96ND0 272 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 GDF15Q99988 308 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 FBXO28Q9NVF7 368 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ARL8BQ9NVJ2 186 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 CTNNA3Q9UI47 895 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 ASAP1Q9ULH1 1129 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 UBE2J1Q9Y385 318 aaPredicted RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 V9GYY5 206 aaPredicted RBP3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 NOTCH4Q99466 2003 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 CUX1P39880 1505 aa3.75□□□□□ -1.81
SDCBPP3-201ENST00000419629 CECR2Q9BXF3 1484 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PNMA6EA0A0J9YXQ4 647 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 CCDC196A0A1B0GTZ2 297 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 ERICH4A6NGS2 130 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 SMTNL1A8MU46 457 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 FFAR2O15552 330 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PRAMEF2O60811 474 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 CD63P08962 238 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 CYP19A1P11511 503 aaPredicted RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 NEFHP12036 1026 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 GALNSP34059 522 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PPM1AP35813 382 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 IGHMBP2P38935 993 aaKnown RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 USP8P40818 1118 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 HTR3AP46098 478 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 TTC3P53804 2025 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 ALDH18A1P54886 795 aaKnown RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 WDR5P61964 334 aaKnown RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 HSF1Q00613 529 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 ID2Q02363 134 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM110CQ1W6H9 321 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 TTC31Q49AM3 519 aaPredicted RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM90A2PQ658T7 463 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 GRHL2Q6ISB3 625 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 CCDC144NLQ6NUI1 221 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 TOGARAM2Q6ZUX3 1019 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PIP4P1Q86T03 277 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 MORC1Q86VD1 984 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 ANKRD13BQ86YJ7 626 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 MYLK4Q86YV6 388 aaPredicted RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 NRSN1Q8IZ57 195 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 SAMD3Q8N6K7 520 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 OTUD6BQ8N6M0 293 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 GPATCH11Q8N954 259 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZNF527Q8NB42 609 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms