RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CYP3A7P24462 503 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 NR4A2P43354 598 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 PRKAA2P54646 552 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 SRSF1Q07955 248 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 BIRC2Q13490 618 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 MTX1Q13505 466 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 MIDNQ504T8 468 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 ERAP2Q6P179 960 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 NFRKBQ6P4R8 1299 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 KLHL17Q6TDP4 642 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 FAM57BQ71RH2 274 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 RASGRP2Q7LDG7 609 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 UEVLDQ8IX04 471 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 PIGOQ8TEQ8 1089 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 TRIM2Q9C040 744 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 ELAC1Q9H777 363 aaKnown RBP5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 TXNRD2Q9NNW7 524 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 PI4KBQ9UBF8 816 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 SRP68Q9UHB9 627 aaKnown RBP5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 NFU1Q9UMS0 254 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 PCDHA10Q9Y5I2 948 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 TRBV5-3A0A0A0MS03 114 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 FAM90A20PA6NIJ5 464 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 LARGE1O95461 756 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 TFEBP19484 476 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 FOXO1Q12778 655 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 KRT72Q14CN4 511 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 LRRC24Q50LG9 513 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 LIPMQ5VYY2 423 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 TTLL5Q6EMB2 1281 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 ANKRD13BQ86YJ7 626 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 PAQR4Q8N4S7 273 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 SRFBP1Q8NEF9 429 aaKnown RBP5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 IP6K1Q92551 441 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 EME1Q96AY2 570 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 DDX23Q9BUQ8 820 aaKnown RBP5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 ZBTB40Q9NUA8 1239 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 KCND3Q9UK17 655 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 FBXO4Q9UKT5 387 aa5.01□□□□□ -1.61
HMGB1P49-201ENST00000418882 LMTK3Q96Q04 1460 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3DA0A087WVF3 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3IA0A087WXS9 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3EA0A087X179 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3KA0A087X1G2 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3BA6NDS4 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3FA6NER0 549 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 MBD3L5A6NJ08 208 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ZNF814B7Z6K7 855 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3LB9A6J9 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 SGPL1O95470 568 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 CD63P08962 238 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3HP0C7X1 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 LYL1P12980 280 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TGM2P21980 687 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 RCAN1P53805 252 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 SLC12A2P55011 1212 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TIGD6Q17RP2 521 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ODF3L2Q3SX64 289 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 GLE1Q53GS7 698 aaKnown RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ARL13AQ5H913 290 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ZNF569Q5MCW4 686 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ATPAF1Q5TC12 328 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3GQ6DHY5 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3CQ6IPX1 549 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 RAB11FIP2Q7L804 512 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 IRF2BP2Q7Z5L9 587 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 SUGP1Q8IWZ8 645 aaKnown RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ADGRF4Q8IZF3 695 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TBC1D3Q8IZP1 549 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 MYCT1Q8N699 235 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ENAHQ8N8S7 591 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 BCAS4Q8TDM0 211 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 ZFYVE19Q96K21 471 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 HTATIP2Q9BUP3 242 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 FRMD8Q9BZ67 464 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 BRD8Q9H0E9 1235 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 AAMDCQ9H7C9 122 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 LIN7CQ9NUP9 197 aaKnown RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 MSRB1Q9NZV6 116 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 UTS2RQ9UKP6 389 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 C19orf53Q9UNZ5 99 aaPredicted RBP5□□□□□ -1.61
HMGB1P49-201ENST00000418882 RIPOR2Q9Y4F9 1068 aa5□□□□□ -1.61
HMGB1P49-201ENST00000418882 TTC3P53804 2025 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 CXorf65A6NEN9 183 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 C3orf70A6NLC5 250 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 H0Y3Z8 333 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 TLX3O43711 291 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 SERPINA4P29622 427 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 CDK7P50613 346 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 PDCLQ13371 301 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 POSTNQ15063 836 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 PXDC1Q5TGL8 231 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 LRCH2Q5VUJ6 765 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 GLCCI1Q86VQ1 547 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 SLC2A12Q8TD20 617 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 CSGALNACT1Q8TDX6 532 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 RILPL2Q969X0 211 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 C3orf49Q96BT1 292 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms