RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 ZNF513Q8N8E2 541 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 SPC24Q8NBT2 197 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 RAB6CQ9H0N0 254 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 TMPRSS4Q9NRS4 437 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 ABCB8Q9NUT2 735 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 KIAA1522Q9P206 1035 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 CTTNBP2NLQ9P2B4 639 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 UVRAGQ9P2Y5 699 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 OR12D3Q9UGF7 316 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 IP6K2Q9UHH9 426 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 LCMT1Q9UIC8 334 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 GGA2Q9UJY4 613 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 SLC8A2Q9UPR5 921 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 MIA3Q5JRA6 1907 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 GOLGA6L3A6NEY3 463 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 DRGXA6NNA5 263 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 PRRT4C9JH25 899 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 I6L893 689 aaPredicted RBP23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 MYO1FO00160 1098 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 NPC1O15118 1278 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 SRGAP2O75044 1071 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 PABPC1P11940 636 aaKnown RBP23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 HLA-FP30511 346 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 CDH4P55283 916 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 SCAPQ12770 1279 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF177Q13360 481 aaPredicted RBP23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 SPA17Q15506 151 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 GEN1Q17RS7 908 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 EFHC2Q5JST6 749 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 EMC10Q5UCC4 262 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 SDE2Q6IQ49 451 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 CHST9Q7L1S5 443 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 SYT13Q7L8C5 426 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 C14orf80Q86SX3 495 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 SFTPA1Q8IWL2 248 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 AHI1Q8N157 1196 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 CCAR2Q8N163 923 aaKnown RBP23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 IGSF8Q969P0 613 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 LUC7LQ9NQ29 371 aaKnown RBP23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 ELOVL2Q9NXB9 296 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 ANAPC7Q9UJX3 599 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 INTUQ9ULD6 942 aa23.82■■□□□ 1.4
SMARCB1-205ENST00000417137 E9PAM4 449 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 PAPSS2O95340 614 aaPredicted RBP23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 MOCS3O95396 460 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 GGCXP38435 758 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 PTPN5P54829 565 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 NRG1Q02297 640 aaPredicted RBP23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 SLC12A1Q13621 1099 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 DMC1Q14565 340 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 EOGTQ5NDL2 527 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 KIAA0907Q7Z7F0 614 aaPredicted RBP23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 CCDC185Q8N715 623 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF564Q8TBZ8 553 aaPredicted RBP23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 ARHGEF26Q96DR7 871 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 TRIM7Q9C029 511 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 CIPCQ9C0C6 399 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 RETREG1Q9H6L5 497 aa23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 PPARGC1AQ9UBK2 798 aaKnown RBP23.81■■□□□ 1.4
SMARCB1-205ENST00000417137 PRPSAP2O60256 369 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 KLF8O95600 359 aaPredicted RBP23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 ATP5BP06576 529 aaKnown RBP23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 HNRNPLP14866 589 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 FECHP22830 423 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 CSTF1Q05048 431 aaKnown RBP23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF683Q8IZ20 524 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 CCDC33Q8N5R6 958 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 ALLCQ8N6M5 410 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 IL17RCQ8NAC3 791 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 PACSIN1Q9BY11 444 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 PRMT8Q9NR22 394 aaPredicted RBP23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 FZD10Q9ULW2 581 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 MMP17Q9ULZ9 603 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 PLA2G4CQ9UP65 541 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 SNX10Q9Y5X0 201 aa23.8■■□□□ 1.4
SMARCB1-205ENST00000417137 IGLV3-10A0A075B6K4 115 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 IPO7O95373 1038 aaKnown RBP23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 POLR2EP19388 210 aaKnown RBP23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 CD70P32970 193 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 PCK1P35558 622 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 MAGEA1P43355 309 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 NRLP54845 237 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 GSDMDP57764 484 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 SATB1Q01826 763 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF252P-AS1Q0IIN9 211 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 LMAN2Q12907 356 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 ZNF528Q3MIS6 628 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 PKN3Q6P5Z2 889 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 CIR1Q86X95 450 aaPredicted RBP23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 RHOT2Q8IXI1 618 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 CHPFQ8IZ52 775 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 TXNDC5Q8NBS9 432 aaKnown RBP23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 WFDC5Q8TCV5 224 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 BAG1Q99933 345 aaPredicted RBP23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 FAM126AQ9BYI3 521 aaPredicted RBP23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 ZYG11BQ9C0D3 744 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 GRPEL1Q9HAV7 217 aa23.79■■□□□ 1.4
SMARCB1-205ENST00000417137 KMT2EQ8IZD2 1858 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms