RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 TGIF1Q15583 401 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 SKIDA1Q1XH10 827 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 INAVAQ3KP66 663 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 ARL13BQ3SXY8 428 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 TMEM119Q4V9L6 283 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 C3orf38Q5JPI3 329 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 HYIQ5T013 277 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 SNX30Q5VWJ9 437 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 KIAA0895LQ68EN5 471 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 NCEH1Q6PIU2 408 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 CCDC81Q6ZN84 652 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 PTRH1Q86Y79 214 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 BRSK2Q8IWQ3 736 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 LRRC52Q8N7C0 313 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 NOC3LQ8WTT2 800 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 POMGNT1Q8WZA1 660 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 HPDLQ96IR7 371 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 CIPCQ9C0C6 399 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 BTBD1Q9H0C5 482 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 PCIF1Q9H4Z3 704 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 POLR1BQ9H9Y6 1135 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 PRSS16Q9NQE7 514 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 AASDHPPTQ9NRN7 309 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 LARSQ9P2J5 1176 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 ADAMTS1Q9UHI8 967 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 ATXN7L1Q9ULK2 861 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 SLC27A6Q9Y2P4 619 aa9.08□□□□□ -0.96
NIF3L1-206ENST00000416651 LY6G6EA0A0G2JKS1 128 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 C10orf142B7Z368 130 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 OPA1O60313 960 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 FAM13AO94988 1023 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 IL18RAPO95256 599 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 PENKP01210 267 aaPredicted RBP9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 HMBSP08397 361 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 CD38P28907 300 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 GNL1P36915 607 aaPredicted RBP9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 CCR10P46092 362 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 BCAT1P54687 386 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 NXPH1P58417 271 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 PPP2CBP62714 309 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 PPP2CAP67775 309 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 TLR1Q15399 786 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 EFHC2Q5JST6 749 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 SERPINA13PQ6UXR4 307 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 CACTIN-AS1Q8N1I8 211 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 OR6B3Q8NGW1 331 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 MMS19Q96T76 1030 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 SMOQ99835 787 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 DUSP9Q99956 384 aaKnown RBP9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 CBWD1Q9BRT8 395 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 DPH1Q9BZG8 443 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 PCED1AQ9H1Q7 454 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 RUBCNLQ9H714 662 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 NDFIP2Q9NV92 336 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 TBC1D7Q9P0N9 293 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 U3KQA8 63 aa9.07□□□□□ -0.96
NIF3L1-206ENST00000416651 FBN2P35556 2912 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 FAM92AA1XBS5 289 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 CYP26A1O43174 497 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 STC2O76061 302 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 EPXP11678 715 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 CDK4P11802 303 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 DDIT3P35638 169 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 TRAPPC10P48553 1259 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 CASP5P51878 434 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 ERVPABLB-1P60509 514 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 CTBSQ01459 385 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 TRIM29Q14134 588 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 CLCA4Q14CN2 919 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 CRTC1Q6UUV9 634 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 FAM35AQ86V20 835 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 SFR1Q86XK3 245 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 WFDC5Q8TCV5 224 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 JAKMIP2Q96AA8 810 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 ABHD17AQ96GS6 310 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 ATXN7L3BQ96GX2 97 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 SLC46A1Q96NT5 459 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 NACA2Q9H009 215 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 EPN3Q9H201 632 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 NEUROG2Q9H2A3 272 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 TMEM245Q9H330 911 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 PARVGQ9HBI0 331 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 RBAKQ9NYW8 714 aaPredicted RBP9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 NOP53Q9NZM5 478 aaKnown RBP9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 ITGA11Q9UKX5 1188 aa9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
NIF3L1-206ENST00000416651 A0A1W2PP55 124 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 A0A1W2PQH9 124 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 H0YCG3 227 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 TLR4O00206 839 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 FFAR2O15552 330 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 NOBOXO60393 691 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 DFNA5O60443 496 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 RTN3O95197 1032 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 CCDC130P13994 396 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 TGM2P21980 687 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 SOX11P35716 441 aa9.05□□□□□ -0.96
NIF3L1-206ENST00000416651 RXRGP48443 463 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms