RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 NDRG1Q92597 394 aaKnown RBP13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 NXPE2Q96DL1 559 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 PRSS16Q9NQE7 514 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 ABCB8Q9NUT2 735 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 PLA2G4CQ9UP65 541 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 URB1O60287 2271 aaKnown RBP13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 PLXNA2O75051 1894 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 IGSF10Q6WRI0 2623 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 TP53BP1Q12888 1972 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 A0A1B0GTQ1 180 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 XPO1O14980 1071 aaKnown RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 PAPSS1O43252 624 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 TLX3O43711 291 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 ZBED1O96006 694 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 IGHV4-34P06331 123 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 SGSHP51688 502 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 GCNT1Q02742 428 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 PDE4CQ08493 712 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 DNAJC3Q13217 504 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 STILQ15468 1287 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 TRIP4Q15650 581 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 TTC31Q49AM3 519 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 RAB41Q5JT25 222 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 FMNL3Q8IVF7 1028 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 WFIKKN2Q8TEU8 576 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 RNF139Q8WU17 664 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 SLC6A18Q96N87 628 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 INTS2Q9H0H0 1204 aaKnown RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 MTG2Q9H4K7 406 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 SGK2Q9HBY8 427 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 GGA2Q9UJY4 613 aa13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 COL5A1P20908 1838 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-202ENST00000415886 FAM47DPA6NHR8 397 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 PES1O00541 588 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 ENC1O14682 589 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 SETSIPP0DME0 302 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 PABPC1P11940 636 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 LCP1P13796 627 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 JUPP14923 745 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 USP8P40818 1118 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 EIF2S3P41091 472 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 C21orf59P57076 290 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 SEMG2Q02383 582 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 ZBTB16Q05516 673 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 CNGA2Q16280 664 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 C6orf118Q5T5N4 469 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 MBLAC2Q68D91 279 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 ZNF776Q68DI1 518 aaPredicted RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 KIAA0895LQ68EN5 471 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 ENOSF1Q7L5Y1 443 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 BHLHA9Q7RTU4 235 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 KIAA0907Q7Z7F0 614 aaPredicted RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 AHI1Q8N157 1196 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 WFDC5Q8TCV5 224 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 CNDP2Q96KP4 475 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 CRACR2AQ9BSW2 395 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 ACE2Q9BYF1 805 aaPredicted RBP13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 ULBP1Q9BZM6 244 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 PRORYQ9H606 182 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 FBRSQ9HAH7 460 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 SERGEFQ9UGK8 458 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 SFMBT1Q9UHJ3 866 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 RAI2Q9Y5P3 530 aa13.74□□□□□ -0.21
CTHRC1-202ENST00000415886 TULP2O00295 520 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 O00370 1275 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 VILLO15195 856 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 ATXN7O15265 892 aaPredicted RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 MED7O43513 233 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 DFNA5O60443 496 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 WNT1P04628 370 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 DLDP09622 509 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 CD70P32970 193 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 HNF1BP35680 557 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 HARS2P49590 506 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 RACK1P63244 317 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 SHBQ15464 509 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 CT47A1Q5JQC4 288 aaPredicted RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 LCLAT1Q6UWP7 414 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 EDEM1Q92611 657 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 KAT5Q92993 513 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 TMA16Q96EY4 203 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 EBF2Q9HAK2 575 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 OLA1Q9NTK5 396 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 PCDHGA1Q9Y5H4 931 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 AK5Q9Y6K8 562 aa13.73□□□□□ -0.21
CTHRC1-202ENST00000415886 A0A1W2PPC4 97 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms