RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 CD48P09326 243 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 CYP2C8P10632 490 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 RBP5P82980 135 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 SMAD1Q15797 465 aaKnown RBP11.88□□□□□ -0.51
SCN4B-202ENST00000415030 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
SCN4B-202ENST00000415030 MPZL3Q6UWV2 235 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 FAM43BQ6ZT52 329 aaPredicted RBP11.88□□□□□ -0.51
SCN4B-202ENST00000415030 STRA8Q7Z7C7 330 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 VSIG10LQ86VR7 867 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 POPDC2Q9HBU9 364 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 SEPT3Q9UH03 358 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
SCN4B-202ENST00000415030 DDX60LQ5H9U9 1706 aaKnown RBP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 CSH1P0DML2 217 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 CSH2P0DML3 217 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 FGFR1P11362 822 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PPARGP37231 505 aaPredicted RBP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 RPL14P50914 215 aaKnown RBP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 RAB15P59190 212 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 LRRC8BQ6P9F7 803 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SLC51AQ86UW1 340 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 COLGALT1Q8NBJ5 622 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 HTR3CQ8WXA8 447 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 USP6NLQ92738 828 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 AGAP3Q96P47 875 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 TEX13BQ9BXU2 312 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 COG4Q9H9E3 785 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 A0A096LPK6 155 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 HEATR9A2RTY3 570 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 TTC36A6NLP5 189 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 MYL3P08590 195 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 ITGAXP20702 1163 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 XYLT1Q86Y38 959 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 ZNF786Q8N393 782 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PRDM16Q9HAZ2 1276 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PFDN4Q9NQP4 134 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 GID8Q9NWU2 228 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 CNTN6Q9UQ52 1028 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SLC15A5A6NIM6 579 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 FAM159BA6NKW6 160 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 TRIM38O00635 465 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SLC22A2O15244 555 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 RFPL1O75677 317 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 CRTAMO95727 393 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PAMP19021 973 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 MAP4P27816 1152 aaKnown RBP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PTGER2P43116 358 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PHKA2P46019 1235 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 GALK1P51570 392 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 KCNT2Q6UVM3 1135 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 IGDCC3Q8IVU1 814 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 GPC2Q8N158 579 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PLD5Q8N7P1 536 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 UBR7Q8N806 425 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCN4B-202ENST00000415030 NMRAL1Q9HBL8 299 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 COL20A1Q9P218 1284 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 CNTN3Q9P232 1028 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 STAP1Q9ULZ2 295 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 RAP2CQ9Y3L5 183 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 PCDHB12Q9Y5F1 795 aa11.87□□□□□ -0.51
SCN4B-202ENST00000415030 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 A0A1B0GVG6 124 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 SNNO75324 88 aaPredicted RBP11.86□□□□□ -0.51
SCN4B-202ENST00000415030 PIGRP01833 764 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 MGAT1P26572 445 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 RAP1GAPP47736 663 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 PKNOX1P55347 436 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 USP4Q13107 963 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 CDHR3Q6ZTQ4 885 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 TMC7Q7Z402 723 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 CLVS1Q8IUQ0 354 aaPredicted RBP11.86□□□□□ -0.51
SCN4B-202ENST00000415030 PGAM4Q8N0Y7 254 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 PCDHAC2Q9Y5I4 1007 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCN4B-202ENST00000415030 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 E5RJQ4 531 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 DENRO43583 198 aaKnown RBP11.86□□□□□ -0.51
SCN4B-202ENST00000415030 IL1R2P27930 398 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 CDH5P33151 784 aaPredicted RBP11.86□□□□□ -0.51
SCN4B-202ENST00000415030 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 MPP3Q13368 585 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 GOLGA7BQ2TAP0 167 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 RAB44Q7Z6P3 723 aaPredicted RBP11.86□□□□□ -0.51
SCN4B-202ENST00000415030 OR6B3Q8NGW1 331 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 NCSTNQ92542 709 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 VPS39Q96JC1 886 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 NACA2Q9H009 215 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 SLC39A10Q9ULF5 831 aa11.86□□□□□ -0.51
SCN4B-202ENST00000415030 MAGED2Q9UNF1 606 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms