RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 GJC1P36383 396 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
CNN3-203ENST00000415017 PAFAH1B3Q15102 231 aaKnown RBP13.7□□□□□ -0.22
CNN3-203ENST00000415017 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
CNN3-203ENST00000415017 GAB4Q2WGN9 574 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 TTC39BQ5VTQ0 682 aaPredicted RBP13.7□□□□□ -0.22
CNN3-203ENST00000415017 FYB2Q5VWT5 728 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 AFMIDQ63HM1 303 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 RFWD3Q6PCD5 774 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 BBS12Q6ZW61 710 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 CHST9Q7L1S5 443 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 RPP25Q9BUL9 199 aaKnown RBP13.7□□□□□ -0.22
CNN3-203ENST00000415017 OSBPL8Q9BZF1 889 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 PRDM6Q9NQX0 595 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 TMEM248Q9NWD8 314 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 FBXO10Q9UK96 956 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 VANGL2Q9ULK5 521 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 TBC1D30Q9Y2I9 924 aa13.7□□□□□ -0.22
CNN3-203ENST00000415017 F5H5T6 163 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 EEF2KO00418 725 aaKnown RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 CHADO15335 359 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 ERCC2P18074 760 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 CXCR5P32302 372 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 GGCXP38435 758 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 ARL4AP40617 200 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 SGSHP51688 502 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 TPI1P60174 286 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 TFF2Q03403 129 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 TUBB2AQ13885 445 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 PDGFRLQ15198 375 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 MPPE1Q53F39 396 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 ALFQ53S48 1182 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 RHBDF2Q6PJF5 856 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 ZNF572Q7Z3I7 529 aaPredicted RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 CHSY1Q86X52 802 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 SLC13A5Q86YT5 568 aaPredicted RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 LGI2Q8N0V4 545 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 UMODL1-AS1Q8N2C9 162 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 KIF18AQ8NI77 898 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 IRF7Q92985 503 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 LMLNQ96KR4 655 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 TUBB2BQ9BVA1 445 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 ZYG11BQ9C0D3 744 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 NOL6Q9H6R4 1146 aaKnown RBP13.69□□□□□ -0.22
CNN3-203ENST00000415017 TRPV5Q9NQA5 729 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 HPS4Q9NQG7 708 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 ETNK2Q9NVF9 386 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 RNF14Q9UBS8 474 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 PRKAG3Q9UGI9 489 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 FAM50BQ9Y247 325 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 WNT6Q9Y6F9 365 aa13.69□□□□□ -0.22
CNN3-203ENST00000415017 A0A1B0GVM2 712 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 ZNF185O15231 689 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 CREB3O43889 395 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 CLDN11O75508 207 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 CNTN5O94779 1100 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 KRT10P13645 584 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 IL9P15248 144 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 AMPD1P23109 780 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 EPHB2P29323 1055 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 CDH4P55283 916 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 RPS24P62847 133 aaKnown RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 KRT81Q14533 505 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 RABGAP1LQ5R372 815 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 NCBP2-AS2Q69YL0 99 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 LRRC31Q6UY01 552 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 KIAA0907Q7Z7F0 614 aaPredicted RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 TMEM25Q86YD3 366 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 HJURPQ8NCD3 748 aaPredicted RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 TMA16Q96EY4 203 aaKnown RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 PSMB7Q99436 277 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 NDFIP2Q9NV92 336 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 THG1LQ9NWX6 298 aaKnown RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 DUS2Q9NX74 493 aaKnown RBP13.68□□□□□ -0.22
CNN3-203ENST00000415017 IGSF9Q9P2J2 1179 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 CDC23Q9UJX2 597 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 NUMBLQ9Y6R0 609 aa13.68□□□□□ -0.22
CNN3-203ENST00000415017 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
CNN3-203ENST00000415017 OTOL1A6NHN0 477 aaPredicted RBP13.67□□□□□ -0.22
CNN3-203ENST00000415017 PDE2AO00408 941 aaPredicted RBP13.67□□□□□ -0.22
CNN3-203ENST00000415017 SCAMP3O14828 347 aaKnown RBP13.67□□□□□ -0.22
CNN3-203ENST00000415017 HOXC11O43248 304 aaPredicted RBP13.67□□□□□ -0.22
CNN3-203ENST00000415017 CYP17A1P05093 508 aa13.67□□□□□ -0.22
CNN3-203ENST00000415017 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
CNN3-203ENST00000415017 CETN2P41208 172 aa13.67□□□□□ -0.22
CNN3-203ENST00000415017 MAPKAPK2P49137 400 aa13.67□□□□□ -0.22
CNN3-203ENST00000415017 SLC10A2Q12908 348 aaPredicted RBP13.67□□□□□ -0.22
CNN3-203ENST00000415017 TFDP2Q14188 446 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms