RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 NLRP14Q86W24 1093 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 BBS7Q8IWZ6 715 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 LGI2Q8N0V4 545 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 RTL3Q8N8U3 475 aaKnown RBP14.69□□□□□ -0.06
SF3B1-204ENST00000414963 PRELID2Q8N945 189 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 SPATA4Q8NEY3 305 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.69□□□□□ -0.06
SF3B1-204ENST00000414963 IGSF8Q969P0 613 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 ZYG11BQ9C0D3 744 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 TMEM248Q9NWD8 314 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 ZNF212Q9UDV6 495 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 NR2E1Q9Y466 385 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 RAD54BQ9Y620 910 aa14.69□□□□□ -0.06
SF3B1-204ENST00000414963 GRXCR2A6NFK2 248 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 CCDC188H7C350 402 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 GGCXP38435 758 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 CCNG2Q16589 344 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 MPP7Q5T2T1 576 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 RNF43Q68DV7 783 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 NCBP2-AS2Q69YL0 99 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 RWDD4Q6NW29 188 aaKnown RBP14.68□□□□□ -0.06
SF3B1-204ENST00000414963 RFWD3Q6PCD5 774 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 DRICH1Q6PGQ1 229 aaPredicted RBP14.68□□□□□ -0.06
SF3B1-204ENST00000414963 CHST9Q7L1S5 443 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 OTOP3Q7RTS5 596 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 LZTR1Q8N653 840 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 C12orf50Q8NA57 414 aaPredicted RBP14.68□□□□□ -0.06
SF3B1-204ENST00000414963 HLA-CQ95604 372 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 RSPRY1Q96DX4 576 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 MYEOVQ96EZ4 313 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 PRICKLE1Q96MT3 831 aaPredicted RBP14.68□□□□□ -0.06
SF3B1-204ENST00000414963 RPRD1AQ96P16 312 aaPredicted RBP14.68□□□□□ -0.06
SF3B1-204ENST00000414963 LRRC3BQ96PB8 259 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 KLC2Q9H0B6 622 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 LRRC19Q9H756 370 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 ETNK2Q9NVF9 386 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 EPS15L1Q9UBC2 864 aa14.68□□□□□ -0.06
SF3B1-204ENST00000414963 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CTAGE15A4D2H0 777 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 H3BQ06 376 aaPredicted RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CLDN11O75508 207 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CTAGE8P0CG41 777 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 KCNA5P22460 613 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 VIPR2P41587 438 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CDH4P55283 916 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 DYNLT1P63172 113 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CCDC85BQ15834 202 aaPredicted RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 AFMIDQ63HM1 303 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 TMCO3Q6UWJ1 677 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 BZW1Q7L1Q6 419 aaKnown RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 ADAT2Q7Z6V5 191 aaKnown RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CTAGE6Q86UF2 777 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CTAGE4Q8IX94 777 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 UMODL1-AS1Q8N2C9 162 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 HJURPQ8NCD3 748 aaPredicted RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 P3H4Q92791 437 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 NKD2Q969F2 451 aaPredicted RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 TMA16Q96EY4 203 aaKnown RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 CARD6Q9BX69 1037 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 AP1M1Q9BXS5 423 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 ZFP14Q9HCL3 533 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 MPP6Q9NZW5 540 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 R3HDM2Q9Y2K5 976 aaKnown RBP14.67□□□□□ -0.06
SF3B1-204ENST00000414963 REV3LO60673 3130 aa14.67□□□□□ -0.06
SF3B1-204ENST00000414963 HEPACAM2A8MVW5 462 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 MBTPS2O43462 519 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 CNTN5O94779 1100 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 PECAM1P16284 738 aaPredicted RBP14.66□□□□□ -0.06
SF3B1-204ENST00000414963 SERPINB6P35237 376 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 MAPKAPK2P49137 400 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 IRAK1P51617 712 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 NDST2P52849 883 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 GBE1Q04446 702 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 FCHO2Q0JRZ9 810 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 SLC10A2Q12908 348 aaPredicted RBP14.66□□□□□ -0.06
SF3B1-204ENST00000414963 XRCC4Q13426 336 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 NOMO1Q15155 1222 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 LEXMQ3ZCV2 418 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 MPPE1Q53F39 396 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 ALFQ53S48 1182 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 TANGO2Q6ICL3 276 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 ADGRG2Q8IZP9 1017 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 TDRD5Q8NAT2 981 aaKnown RBP14.66□□□□□ -0.06
SF3B1-204ENST00000414963 SLC35B2Q8TB61 432 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 ACTL9Q8TC94 416 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 BPIFB1Q8TDL5 484 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 OSCP1Q8WVF1 389 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 ELSPBP1Q96BH3 223 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 OLFM3Q96PB7 478 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 RBM12Q9NTZ6 932 aaKnown RBP14.66□□□□□ -0.06
SF3B1-204ENST00000414963 DTLQ9NZJ0 730 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 DRG1Q9Y295 367 aaKnown RBP14.66□□□□□ -0.06
SF3B1-204ENST00000414963 MFHAS1Q9Y4C4 1052 aa14.66□□□□□ -0.06
SF3B1-204ENST00000414963 HELZP42694 1942 aaKnown RBP14.66□□□□□ -0.06
SF3B1-204ENST00000414963 BRWD1Q9NSI6 2320 aa14.65□□□□□ -0.06
SF3B1-204ENST00000414963 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
SF3B1-204ENST00000414963 TCAF2A6NFQ2 919 aa14.65□□□□□ -0.06
SF3B1-204ENST00000414963 ANHXE9PGG2 379 aa14.65□□□□□ -0.06
SF3B1-204ENST00000414963 NCAM2O15394 837 aa14.65□□□□□ -0.06
SF3B1-204ENST00000414963 LIASO43766 372 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms