RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 RNPEPL1Q9HAU8 725 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 GPRC5CQ9NQ84 441 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 SIRT5Q9NXA8 310 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PCOLCE2Q9UKZ9 415 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PCDHGB4Q9UN71 923 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 RPL26L1Q9UNX3 145 aaKnown RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 EXOC7Q9UPT5 735 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 SYNGAP1Q96PV0 1343 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 A0A087X0T9 212 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 A0A0A6YYK5 440 aaPredicted RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 RGSL1A5PLK6 1076 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 TTI1O43156 1089 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 STRNO43815 780 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 PRPSAP2O60256 369 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 KERAO60938 352 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SEC22BO75396 215 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 LMNAP02545 664 aaKnown RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 GSTA2P09210 222 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 FAM228BP0C875 321 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 AKAP5P24588 427 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 PSMA4P25789 261 aaKnown RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 YWHABP31946 246 aaKnown RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ICAM3P32942 547 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 QARSP47897 775 aaKnown RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 CASP5P51878 434 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DHX34Q14147 1143 aaKnown RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 RNF43Q68DV7 783 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 RINT1Q6NUQ1 792 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ABHD15Q6UXT9 468 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 KSR1Q8IVT5 923 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 AGGF1Q8N302 714 aaeCLIP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SYT2Q8N9I0 419 aaPredicted RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 LRRC57Q8N9N7 239 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 AGBL5Q8NDL9 886 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DENND6BQ8NEG7 585 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ACMSDQ8TDX5 336 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ADAMTS15Q8TE58 950 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 CASP10Q92851 521 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 PCYT2Q99447 389 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 GORASP1Q9BQQ3 440 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ROPN1BQ9BZX4 212 aaPredicted RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 AZI2Q9H6S1 392 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ROPN1Q9HAT0 212 aaPredicted RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 TUFT1Q9NNX1 390 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 CTTNBP2NLQ9P2B4 639 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 PCDHA10Q9Y5I2 948 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 GSTTP1A0A1W2PQM5 241 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DAB1O75553 588 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 TCF7P36402 384 aaPredicted RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 RBP5P82980 135 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 PRKCEQ02156 737 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 TRIM32Q13049 653 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 COASYQ13057 564 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 GIT2Q14161 759 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 IKBKEQ14164 716 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SURF1Q15526 300 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 TBC1D25Q3MII6 688 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DUPD1Q68J44 220 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 CCDC62Q6P9F0 684 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 VHLLQ6RSH7 139 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 MAMDC4Q6UXC1 1216 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DGLUCYQ7Z3D6 616 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SPATA21Q7Z572 469 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SLFN11Q7Z7L1 901 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SESTD1Q86VW0 696 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SCUBE1Q8IWY4 988 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 TMCO5AQ8N6Q1 288 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 RFWD2Q8NHY2 731 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SPATA33Q96N06 139 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ERP44Q9BS26 406 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 DPH5Q9H2P9 285 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 PREBQ9HCU5 417 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 C14orf119Q9NWQ9 140 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 KLHL14Q9P2G3 628 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 MTRF1LQ9UGC7 380 aaKnown RBP9.67□□□□□ -0.86
SNHG3-201ENST00000413987 WDR81Q562E7 1941 aa9.67□□□□□ -0.86
SNHG3-201ENST00000413987 ASB14A6NK59 587 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 MEN1O00255 615 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 NKRFO15226 690 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 RNF8O76064 485 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 NOL4O94818 638 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 UNC5CO95185 931 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 STAU1O95793 577 aaKnown RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 HNRNPLP14866 589 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 KELP23276 732 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 RARRES1P49788 294 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 HNMTP50135 292 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 JAK3P52333 1124 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 PTENP60484 403 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 IL2P60568 153 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 FKBP3Q00688 224 aaKnown RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 ACVR2BQ13705 512 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 STARD3Q14849 445 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
SNHG3-201ENST00000413987 TNFAIP8L3Q5GJ75 292 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 MFSD5Q6N075 450 aa9.66□□□□□ -0.86
SNHG3-201ENST00000413987 LRRC55Q6ZSA7 311 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms