RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
PCCA-204ENST00000413170 C10orf142B7Z368 130 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 EFSO43281 561 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 SLC8A1P32418 973 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 CD70P32970 193 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 PSEN1P49768 467 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 SGSHP51688 502 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 KIF11P52732 1056 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 ASIC1P78348 528 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 POM121L1PQ3SYA9 428 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 USP53Q70EK8 1073 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 SV2BQ7L1I2 683 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
PCCA-204ENST00000413170 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCCA-204ENST00000413170 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 STK17AQ9UEE5 414 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 KIF3AQ9Y496 699 aa13.24□□□□□ -0.29
PCCA-204ENST00000413170 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 CDRT15L2A8MXV6 281 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 LATO43561 262 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 MAGEC1O60732 1142 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 GP1BAP07359 652 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 PYGBP11216 843 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 CASP4P49662 377 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 ST8SIA6P61647 398 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
PCCA-204ENST00000413170 BMT2Q1RMZ1 405 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 HNRNPA1L2Q32P51 320 aaKnown RBP13.23□□□□□ -0.29
PCCA-204ENST00000413170 HIST2H2BCQ6DN03 193 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.29
PCCA-204ENST00000413170 KIAA0907Q7Z7F0 614 aaPredicted RBP13.23□□□□□ -0.29
PCCA-204ENST00000413170 IQCHQ86VS3 1027 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 IFI44Q8TCB0 444 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 PLD4Q96BZ4 506 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 TMA16Q96EY4 203 aaKnown RBP13.23□□□□□ -0.29
PCCA-204ENST00000413170 MYO19Q96H55 970 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 PRR11Q96HE9 360 aaPredicted RBP13.23□□□□□ -0.29
PCCA-204ENST00000413170 APOLD1Q96LR9 279 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 TJP2Q9UDY2 1190 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 ATXN7L1Q9ULK2 861 aaPredicted RBP13.23□□□□□ -0.29
PCCA-204ENST00000413170 MAN2B2Q9Y2E5 1009 aa13.23□□□□□ -0.29
PCCA-204ENST00000413170 UBE4BO95155 1302 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 LY6G6EA0A0G2JKS1 128 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 FRMD3A2A2Y4 597 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 CLIC2O15247 247 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 TNFSF15O95150 251 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 GOT1P17174 413 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 TGM2P21980 687 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 HOXD13P35453 343 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 NCOA4Q13772 614 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 STAT4Q14765 748 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 C9orf64Q5T6V5 341 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 RRAGBQ5VZM2 374 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 PRPF39Q86UA1 669 aaKnown RBP13.22□□□□□ -0.29
PCCA-204ENST00000413170 CRYBG2Q8N1P7 616 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 ARL14Q8N4G2 192 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 MYOCQ99972 504 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 VRTNQ9H8Y1 702 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 PNPLA8Q9NP80 782 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 AGPAT3Q9NRZ7 376 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 ARHGAP20Q9P2F6 1191 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 U3KQA8 63 aa13.22□□□□□ -0.29
PCCA-204ENST00000413170 NBASA2RRP1 2371 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 TTC34A8MYJ7 566 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 PPFIA2O75334 1257 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 GJB6O95452 261 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 ITGB2P05107 769 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 ALPPL2P10696 532 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.29
PCCA-204ENST00000413170 METAP1P53582 386 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 OVGP1Q12889 678 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 SERINC3Q13530 473 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 CRTC1Q6UUV9 634 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 XKR5Q6UX68 686 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.21□□□□□ -0.29
PCCA-204ENST00000413170 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 CLEC14AQ86T13 490 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.29
PCCA-204ENST00000413170 TWNKQ96RR1 684 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 CYTH4Q9UIA0 394 aa13.21□□□□□ -0.29
PCCA-204ENST00000413170 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
PCCA-204ENST00000413170 USP3Q9Y6I4 520 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms