RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 PITRM1Q5JRX3 1037 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 EFHC1Q5JVL4 640 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 WDR45BQ5MNZ6 344 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 MPP7Q5T2T1 576 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 KLHDC7AQ5VTJ3 777 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 DCAF12L1Q5VU92 463 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 DPY19L2P1Q6NXN4 242 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 KIAA0907Q7Z7F0 614 aaPredicted RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 FAM71AQ8IYT1 594 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 APCDD1Q8J025 514 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 ZCCHC9Q8N567 271 aaKnown RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 ATP6V0D2Q8N8Y2 350 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 CEP76Q8TAP6 659 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 GPT2Q8TD30 523 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 FOXJ1Q92949 421 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 LMLNQ96KR4 655 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 BTN2A3PQ96KV6 586 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 RPL10LQ96L21 214 aaKnown RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 NUP58Q9BVL2 599 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 SIK2Q9H0K1 926 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 TMEM245Q9H330 911 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 PRSS16Q9NQE7 514 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00963-201ENST00000412141 EIF2B4Q9UI10 523 aaKnown RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 ADAMTS9Q9P2N4 1935 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 FAM47DPA6NHR8 397 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 TTC34A8MYJ7 566 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 KCNU1A8MYU2 1149 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 F5H5T6 163 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 GOLGA8SH3BPF8 625 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 ARHGAP33O14559 1287 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 HSF2BPO75031 334 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 SIN3BO75182 1162 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 LUC7L3O95232 432 aaKnown RBP11.99□□□□□ -0.49
LINC00963-201ENST00000412141 IGLV3-25P01717 112 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 DNTTP04053 509 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 GNSP15586 552 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 PDGFRAP16234 1089 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 OXTRP30559 389 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 ACSL1P33121 698 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 DPP6P42658 865 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 STK19P49842 368 aaPredicted RBP11.99□□□□□ -0.49
LINC00963-201ENST00000412141 BPIFB4P59827 614 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 RPS14P62263 151 aaKnown RBP11.99□□□□□ -0.49
LINC00963-201ENST00000412141 SLC6A3Q01959 620 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 CENPCQ03188 943 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 RNF219Q5W0B1 726 aaPredicted RBP11.99□□□□□ -0.49
LINC00963-201ENST00000412141 OLFML1Q6UWY5 402 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 PHLDB2Q86SQ0 1253 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
LINC00963-201ENST00000412141 HDDC3Q8N4P3 179 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 MINDY1Q8N5J2 469 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 TMEM35BQ8NCS4 154 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 SLC2A13Q96QE2 648 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 C6orf106Q9H6K1 298 aaPredicted RBP11.99□□□□□ -0.49
LINC00963-201ENST00000412141 CAPN10Q9HC96 672 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 SUN2Q9UH99 717 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 SLCO3A1Q9UIG8 710 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 SNX10Q9Y5X0 201 aa11.99□□□□□ -0.49
LINC00963-201ENST00000412141 CFAP47Q6ZTR5 3102 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 PLXND1Q9Y4D7 1925 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 M0QYT0 321 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 FSBPO95073 299 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 MOCS3O95396 460 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 GLI1P08151 1106 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 MMEP08473 750 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 UCHL3P15374 230 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 CYP11B1P15538 503 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 SPINK2P20155 84 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 EEF1GP26641 437 aaKnown RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 MZF1P28698 734 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 CCR1P32246 355 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 HOXD12P35452 270 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 IRAK1P51617 712 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 SNX16P57768 344 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 ECT2LQ008S8 904 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 FOXC1Q12948 553 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 KRT31Q15323 416 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 PEAR1Q5VY43 1037 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 ZNF776Q68DI1 518 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 FBXL22Q6P050 247 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 C14orf80Q86SX3 495 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 NOP9Q86U38 636 aaKnown RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 CCAR2Q8N163 923 aaKnown RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 CPA5Q8WXQ8 436 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 TTC17Q96AE7 1141 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 MRGPRX3Q96LB0 322 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 RPRD1AQ96P16 312 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 GBP4Q96PP9 640 aa11.98□□□□□ -0.49
LINC00963-201ENST00000412141 FAM207AQ9NSI2 230 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-201ENST00000412141 FANCLQ9NW38 375 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms